RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 BEX3Q00994 111 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 KRT32Q14532 448 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 NEK1Q96PY6 1258 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 IWS1Q96ST2 819 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 RMDN3Q96TC7 470 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 LZTS2Q9BRK4 669 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 MROH7Q68CQ1 1323 aa19.72■□□□□ 0.75
HSPG2-209ENST00000480900 A0A0U1RQG5 324 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-209ENST00000480900 NKRFO15226 690 aaKnown RBP eCLIP19.71■□□□□ 0.75
HSPG2-209ENST00000480900 PQBP1O60828 265 aaKnown RBP19.71■□□□□ 0.75
HSPG2-209ENST00000480900 CABYRO75952 493 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 CLTBP09497 229 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 PPP2R5BQ15173 497 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 TMEM63BQ5T3F8 832 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 RASEFQ8IZ41 740 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 PRDM5Q9NQX1 630 aaPredicted RBP19.71■□□□□ 0.75
HSPG2-209ENST00000480900 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
HSPG2-209ENST00000480900 DCDC2CA8MYV0 355 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 PTGS1P23219 599 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 LRRC2Q9BYS8 371 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 PXMP2Q9NR77 195 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 PCDH10Q9P2E7 1040 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 SLC12A7Q9Y666 1083 aa19.7■□□□□ 0.74
HSPG2-209ENST00000480900 TRIM43BA6NCK2 446 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 ARVCFO00192 962 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 CDK7P50613 346 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 EXOSC10Q01780 885 aaKnown RBP19.69■□□□□ 0.74
HSPG2-209ENST00000480900 TTLL4Q14679 1199 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 STXBP2Q15833 593 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 ARHGEF16Q5VV41 709 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 CXCL17Q6UXB2 119 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
HSPG2-209ENST00000480900 SH3RF1Q7Z6J0 888 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 TDHQ8IZJ6 230 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 KCNB2Q92953 911 aa19.69■□□□□ 0.74
HSPG2-209ENST00000480900 TRIM43Q96BQ3 446 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-209ENST00000480900 RRP36Q96EU6 259 aaKnown RBP19.69■□□□□ 0.74
HSPG2-209ENST00000480900 KIAA0355O15063 1070 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 REC8O95072 547 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 PLEKHA8P1O95397 391 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 CENPBP07199 599 aaPredicted RBP19.68■□□□□ 0.74
HSPG2-209ENST00000480900 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
HSPG2-209ENST00000480900 TXNP10599 105 aaKnown RBP19.68■□□□□ 0.74
HSPG2-209ENST00000480900 EIF2AK2P19525 551 aaKnown RBP19.68■□□□□ 0.74
HSPG2-209ENST00000480900 CPT1AP50416 773 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 ADCK5Q3MIX3 580 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 OR6J1Q8NGC5 347 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 SEZ6LQ9BYH1 1024 aa19.68■□□□□ 0.74
HSPG2-209ENST00000480900 SEC63Q9UGP8 760 aaKnown RBP19.68■□□□□ 0.74
HSPG2-209ENST00000480900 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
HSPG2-209ENST00000480900 NR3C2P08235 984 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 POLR2MP0CAP2 368 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 RXRAP19793 462 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 HOXA13P31271 388 aaPredicted RBP19.67■□□□□ 0.74
HSPG2-209ENST00000480900 HSPA4P34932 840 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 FAAP100Q0VG06 881 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 BRDTQ58F21 947 aaPredicted RBP19.67■□□□□ 0.74
HSPG2-209ENST00000480900 SRBD1Q8N5C6 995 aaKnown RBP19.67■□□□□ 0.74
HSPG2-209ENST00000480900 FANCBQ8NB91 859 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 SLC43A3Q8NBI5 491 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 PIBF1Q8WXW3 757 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 TMEM39AQ9NV64 488 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
HSPG2-209ENST00000480900 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
HSPG2-209ENST00000480900 ARIH2O95376 493 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 CCDC62Q6P9F0 684 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 APOA5Q6Q788 366 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 SYNE3Q6ZMZ3 975 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 TMTC3Q6ZXV5 915 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 MICU3Q86XE3 530 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 BADQ92934 168 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 TCEANC2Q96MN5 208 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 PDCD2LQ9BRP1 358 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 TBX21Q9UL17 535 aa19.66■□□□□ 0.74
HSPG2-209ENST00000480900 SZT2Q5T011 3432 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 TLR3O15455 904 aaKnown RBP19.65■□□□□ 0.74
HSPG2-209ENST00000480900 ITGA7Q13683 1181 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 LRIT3Q3SXY7 679 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 SEPT14Q6ZU15 432 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 RAB11FIP4Q86YS3 637 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 FAM126BQ8IXS8 530 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 COPS5Q92905 334 aa19.65■□□□□ 0.74
HSPG2-209ENST00000480900 A6NJR5 290 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 EPB41L2O43491 1005 aaKnown RBP19.64■□□□□ 0.73
HSPG2-209ENST00000480900 KPNA6O60684 536 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 RAG1P15918 1043 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 ITGB8P26012 769 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 PURAQ00577 322 aaKnown RBP19.64■□□□□ 0.73
HSPG2-209ENST00000480900 PGM5Q15124 567 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 RBM28Q9NW13 759 aaKnown RBP19.64■□□□□ 0.73
HSPG2-209ENST00000480900 GRIN2DO15399 1336 aa19.64■□□□□ 0.73
HSPG2-209ENST00000480900 LAMA2P24043 3122 aaKnown RBP19.63■□□□□ 0.73
HSPG2-209ENST00000480900 FRMPD4Q14CM0 1322 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 SOX1O00570 391 aaPredicted RBP19.63■□□□□ 0.73
HSPG2-209ENST00000480900 GH1P01241 217 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 CD4P01730 458 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 RCAN1P53805 252 aa19.63■□□□□ 0.73
HSPG2-209ENST00000480900 VSIG10LQ86VR7 867 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms