RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 KRT23Q9C075 422 aa22.02■■□□□ 1.12
ABCF3-214ENST00000480562 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
ABCF3-214ENST00000480562 COL20A1Q9P218 1284 aa22.02■■□□□ 1.12
ABCF3-214ENST00000480562 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.11
ABCF3-214ENST00000480562 ARIH2O95376 493 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 PARP1P09874 1014 aaKnown RBP22.01■■□□□ 1.11
ABCF3-214ENST00000480562 TXNP10599 105 aaKnown RBP22.01■■□□□ 1.11
ABCF3-214ENST00000480562 QRICH1Q2TAL8 776 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 FAM47CQ5HY64 1035 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 SYTL5Q8TDW5 730 aaPredicted RBP22.01■■□□□ 1.11
ABCF3-214ENST00000480562 SCLYQ96I15 445 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 TAAR1Q96RJ0 339 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 ABCB11O95342 1321 aa22.01■■□□□ 1.11
ABCF3-214ENST00000480562 B4DLN1 442 aa22■■□□□ 1.11
ABCF3-214ENST00000480562 MRPL12P52815 198 aaKnown RBP22■■□□□ 1.11
ABCF3-214ENST00000480562 NBPF20Q3BBV1 942 aa22■■□□□ 1.11
ABCF3-214ENST00000480562 BRDTQ58F21 947 aaPredicted RBP22■■□□□ 1.11
ABCF3-214ENST00000480562 UBAC1Q9BSL1 405 aa22■■□□□ 1.11
ABCF3-214ENST00000480562 JMJD4Q9H9V9 463 aa22■■□□□ 1.11
ABCF3-214ENST00000480562 A6NJR5 290 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 GSPT1P15170 499 aaKnown RBP21.99■■□□□ 1.11
ABCF3-214ENST00000480562 TTLL4Q14679 1199 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 SEPT14Q6ZU15 432 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 FBXO11Q86XK2 927 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 VWCEQ96DN2 955 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 MTIF3Q9H2K0 278 aaKnown RBP21.99■■□□□ 1.11
ABCF3-214ENST00000480562 CNNM2Q9H8M5 875 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 SUPT16HQ9Y5B9 1047 aaKnown RBP21.99■■□□□ 1.11
ABCF3-214ENST00000480562 RAD50Q92878 1312 aa21.99■■□□□ 1.11
ABCF3-214ENST00000480562 SUPT20HL2P0C7V6 817 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 IFIT1BQ5T764 474 aaKnown RBP21.98■■□□□ 1.11
ABCF3-214ENST00000480562 TTC22Q5TAA0 569 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 CCDC62Q6P9F0 684 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 RPUSD2Q8IZ73 545 aaKnown RBP21.98■■□□□ 1.11
ABCF3-214ENST00000480562 STAG2Q8N3U4 1231 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 USP38Q8NB14 1042 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 MSRAQ9UJ68 235 aa21.98■■□□□ 1.11
ABCF3-214ENST00000480562 MRPL11Q9Y3B7 192 aaKnown RBP21.98■■□□□ 1.11
ABCF3-214ENST00000480562 CHD9Q3L8U1 2897 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 KPNA6O60684 536 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 CHMP4BP1P59074 171 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 MCF2L2Q86YR7 1114 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 NSUN6Q8TEA1 469 aaKnown RBP21.97■■□□□ 1.11
ABCF3-214ENST00000480562 RMDN3Q96TC7 470 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 NKX2-4Q9H2Z4 354 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 PRDM12Q9H4Q4 367 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 YBX2Q9Y2T7 364 aaKnown RBP21.97■■□□□ 1.11
ABCF3-214ENST00000480562 SCN10AQ9Y5Y9 1956 aa21.97■■□□□ 1.11
ABCF3-214ENST00000480562 SEC23AQ15436 765 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 RAB30Q15771 203 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 LY6KQ17RY6 165 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 DEFB128Q7Z7B8 93 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 AFG1LQ8WV93 481 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 MAF1Q9H063 256 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 VCANP13611 3396 aa21.96■■□□□ 1.11
ABCF3-214ENST00000480562 ZBBXA8MT70 800 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 RABGGTBP53611 331 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 STXBP2Q15833 593 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 NFRKBQ6P4R8 1299 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 CHST3Q7LGC8 479 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 SLC4A7Q9Y6M7 1214 aa21.95■■□□□ 1.1
ABCF3-214ENST00000480562 MYH6P13533 1939 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 MYO9BQ13459 2157 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 KLRF2D3W0D1 207 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 CFBP00751 764 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 GH1P01241 217 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 EIF2AK2P19525 551 aaKnown RBP21.94■■□□□ 1.1
ABCF3-214ENST00000480562 PTH1RQ03431 593 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 ARHGAP1Q07960 439 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 ARHGEF16Q5VV41 709 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 IWS1Q96ST2 819 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 GAS2L1Q99501 681 aaPredicted RBP21.94■■□□□ 1.1
ABCF3-214ENST00000480562 AMNQ9BXJ7 453 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 GBF1Q92538 1859 aa21.94■■□□□ 1.1
ABCF3-214ENST00000480562 OPLAHO14841 1288 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 PPP1R11O60927 126 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-214ENST00000480562 MMP3P08254 477 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 MYOGP15173 224 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
ABCF3-214ENST00000480562 PPM1EQ8WY54 764 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 PXMP2Q9NR77 195 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 MAD2L2Q9UI95 211 aa21.93■■□□□ 1.1
ABCF3-214ENST00000480562 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
ABCF3-214ENST00000480562 CHMLP26374 656 aa21.92■■□□□ 1.1
ABCF3-214ENST00000480562 PTPN11Q06124 597 aaPredicted RBP21.92■■□□□ 1.1
ABCF3-214ENST00000480562 TRDNQ13061 729 aa21.92■■□□□ 1.1
ABCF3-214ENST00000480562 SLC28A3Q9HAS3 691 aa21.92■■□□□ 1.1
ABCF3-214ENST00000480562 SENP2Q9HC62 589 aa21.92■■□□□ 1.1
ABCF3-214ENST00000480562 DDX41Q9UJV9 622 aaKnown RBP21.92■■□□□ 1.1
ABCF3-214ENST00000480562 PALM3A6NDB9 673 aaPredicted RBP21.91■■□□□ 1.1
ABCF3-214ENST00000480562 ZBTB5O15062 677 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 NR3C2P08235 984 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 PFKMP08237 780 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 CYP21A2P08686 494 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 HSD17B4P51659 736 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 ADGRE1Q14246 886 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 SLC35G1Q2M3R5 365 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 RETREG2Q8NC44 543 aa21.91■■□□□ 1.1
ABCF3-214ENST00000480562 MTMR8Q96EF0 704 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms