RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 CNBD1Q8NA66 436 aa9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 RSRC1Q96IZ7 334 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 CPSF2Q9P2I0 782 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 BAIAP2L1Q9UHR4 511 aa9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 ANAPC4Q9UJX5 808 aa9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-203ENST00000480242 SYNRGQ9UMZ2 1314 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 MACROD2A1Z1Q3 448 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 CLSTN1O94985 981 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 NDUFA10O95299 355 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 IDEP14735 1019 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 SKOR1P84550 965 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 SF3A3Q12874 501 aaKnown RBP eCLIP9.4□□□□□ -0.916e-9■■■■■ 32.1
SNRNP200-203ENST00000480242 MORC3Q14149 939 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 NFIXQ14938 502 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 SLC51AQ86UW1 340 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 SPATA5Q8NB90 893 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 MYCBPAPQ8TBZ2 947 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 PHKBQ93100 1093 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 NACAP1Q9BZK3 213 aa9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 PIH1D3Q9NQM4 214 aaKnown RBP9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 AATFQ9NY61 560 aaKnown RBP eCLIP9.4□□□□□ -0.91
SNRNP200-203ENST00000480242 GAKO14976 1311 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 KLHL33A6NCF5 533 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 TMEM67Q5HYA8 995 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 APTXQ7Z2E3 356 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 ZIM3Q96PE6 472 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 BRIP1Q9BX63 1249 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 TAB2Q9NYJ8 693 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 MYH6P13533 1939 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 ATRNL1Q5VV63 1379 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 MYH4Q9Y623 1939 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 MAST3O60307 1309 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 PPP1R37O75864 691 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 GRIK3Q13003 919 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 PTGISQ16647 500 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 SPRED3Q2MJR0 410 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 SPATA1Q5VX52 437 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 NOC3LQ8WTT2 800 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 ZBED3Q96IU2 234 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 UBAC1Q9BSL1 405 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 IRAK4Q9NWZ3 460 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 SMARCAL1Q9NZC9 954 aa9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 ATXN2Q99700 1313 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-203ENST00000480242 PSMD14O00487 310 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 MYO1EQ12965 1108 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 RASGRF1Q13972 1273 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 KCNB1Q14721 858 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 LPIN2Q92539 896 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 CCDC51Q96ER9 411 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 DNM1LO00429 736 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 PDE6AP16499 860 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 NR1D1P20393 614 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 GRAPQ13588 217 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 SNX1Q13596 522 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 TRIM29Q14134 588 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 ZSCAN29Q8IWY8 852 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 GRAPLQ8TC17 118 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 MICAL1Q8TDZ2 1067 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 SH3GL3Q99963 347 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 SAP30BPQ9UHR5 308 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 A6NNZ2 444 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 PBX1P40424 430 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 SSR1P43307 286 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 DYNLL1P63167 89 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 PICALMQ13492 652 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 TSR1Q2NL82 804 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 TUBB8Q3ZCM7 444 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 YTHDF3Q7Z739 585 aaKnown RBP9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 STAMQ92783 540 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 PLCD4Q9BRC7 762 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 MTFR1LQ9H019 292 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 ATP6V0A4Q9HBG4 840 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 VAT1LQ9HCJ6 419 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 HELLSQ9NRZ9 838 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 SH3BP1Q9Y3L3 701 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 DUSP10Q9Y6W6 482 aa9.38□□□□□ -0.91
SNRNP200-203ENST00000480242 UBE2Q2LH0YL09 131 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 CXCR5P32302 372 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 SLC8A1P32418 973 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 IQCEQ6IPM2 695 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 CCDC50Q8IVM0 306 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 NSMCE1Q8WV22 266 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 LMBR1Q8WVP7 490 aa9.37□□□□□ -0.91
SNRNP200-203ENST00000480242 IFT81Q8WYA0 676 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms