RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MRPL11Q9Y3B7 192 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP10DQ9P241 1426 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP7BP35670 1465 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 IFNB1P01574 187 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 PYGBP11216 843 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP1A2P50993 1020 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 SCRN1Q12765 414 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 SURF1Q15526 300 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ATG16L1Q676U5 607 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 MYCT1Q8N699 235 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 RSAD2Q8WXG1 361 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 MRPL44Q9H9J2 332 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 USP40Q9NVE5 1235 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 INHBAP08476 426 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TMTC3Q6ZXV5 915 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 BZW1Q7L1Q6 419 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 MCF2L2Q86YR7 1114 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TCP11Q8WWU5 503 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 ANKRD7Q92527 254 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 MAML3Q96JK9 1138 aa6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 DBNLQ9UJU6 430 aaKnown RBP6.69□□□□□ -1.34
PRPF4B-205ENST00000480058 TMEM110-MUSTN1A8MSY1 372 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KLRF2D3W0D1 207 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 USP17L21D6R901 530 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 CCNT1O60563 726 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GJC1P36383 396 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TFDP2Q14188 446 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 LONRF3Q496Y0 759 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GPBP1Q86WP2 473 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 WDR75Q8IWA0 830 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SUPT20HQ8NEM7 779 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 IL17REQ8NFR9 667 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 CENPKQ9BS16 269 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 AMNQ9BXJ7 453 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 VPS54Q9P1Q0 977 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 HESX1Q9UBX0 185 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KCNJ14Q9UNX9 436 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ZNF148Q9UQR1 794 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ARHGAP42A6NI28 874 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 MEFVO15553 781 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 PFDN1O60925 122 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 AFPP02771 609 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KCNA6P17658 529 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 PSMC2P35998 433 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GUCY2FP51841 1108 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SGMS1Q86VZ5 419 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ZBTB38Q8NAP3 1195 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 DDX27Q96GQ7 796 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GMNCA6NCL1 334 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TXNDC9O14530 226 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TBC1D8O95759 1140 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT3P12035 628 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT5P13647 590 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 POLR2FP61218 127 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 RPS6KA2Q15349 733 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 C11orf57Q6ZUT1 292 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SYCP2Q9BX26 1530 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KRT38O76015 456 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ARL1P40616 181 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SPARCL1Q14515 664 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 KCNB1Q14721 858 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 PLCB4Q15147 1175 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TAF11Q15544 211 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SRLQ86TD4 932 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SCYL3Q8IZE3 742 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 FMR1NBQ8N0W7 255 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SYMPKQ92797 1274 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TMEM60Q9H2L4 133 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 XPOTO43592 962 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 CREB3O43889 395 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GAS7O60861 476 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 CHRNA3P32297 505 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 UAP1Q16222 522 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 PDCD2Q16342 344 aaPredicted RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SLC4A8Q2Y0W8 1093 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 LRIG3Q6UXM1 1119 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 TRIM55Q9BYV6 548 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 GOLGA8MH3BSY2 632 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 CHGBP05060 677 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 ACTN1P12814 892 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 RXRAP19793 462 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 COG7P83436 770 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 UPF3AQ9H1J1 476 aaKnown RBP6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 SEL1LQ9UBV2 794 aa6.68□□□□□ -1.34
PRPF4B-205ENST00000480058 MAP3K7O43318 606 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 GCNT3O95395 438 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 NR2F2P24468 414 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ZBTB8OSQ8IWT0 167 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ATP6V0A1Q93050 837 aa6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 LRRC59Q96AG4 307 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 ALKBH8Q96BT7 664 aaKnown RBP6.67□□□□□ -1.34
PRPF4B-205ENST00000480058 SGSM3Q96HU1 749 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms