RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TCP10L2B9ZVM9 353 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
SEC13-216ENST00000479868 TUBB4AP04350 444 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 ECM1Q16610 540 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 TTLL6Q8N841 843 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 KIAA0895Q8NCT3 520 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 CCDC47Q96A33 483 aaKnown RBP14.58□□□□□ -0.08
SEC13-216ENST00000479868 DHTKD1Q96HY7 919 aaPredicted RBP14.58□□□□□ -0.08
SEC13-216ENST00000479868 UIMC1Q96RL1 719 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 THAP9Q9H5L6 903 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 L2HGDHQ9H9P8 463 aa14.58□□□□□ -0.08
SEC13-216ENST00000479868 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
SEC13-216ENST00000479868 A0A1W2PRG0 241 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 CLRN2A0PK11 232 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 MEIS2O14770 477 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 UBXN1Q04323 297 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 SYCP1Q15431 976 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 RBM26Q5T8P6 1007 aaKnown RBP14.57□□□□□ -0.08
SEC13-216ENST00000479868 KRT79Q5XKE5 535 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 RSBN1LQ6PCB5 846 aaPredicted RBP14.57□□□□□ -0.08
SEC13-216ENST00000479868 RAD9BQ6WBX8 426 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 MTERF4Q7Z6M4 381 aaKnown RBP14.57□□□□□ -0.08
SEC13-216ENST00000479868 CNGA4Q8IV77 575 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 GMCL1Q96IK5 515 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
SEC13-216ENST00000479868 ANO3Q9BYT9 981 aa14.57□□□□□ -0.08
SEC13-216ENST00000479868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.57□□□□□ -0.081e-7■□□□□ 8.8
SEC13-216ENST00000479868 PSMD14O00487 310 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 CCNE1P24864 410 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 ANKRD40Q6AI12 368 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 DYMQ7RTS9 669 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 CSGALNACT2Q8N6G5 542 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 RAD54LQ92698 747 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 P2RX5Q93086 422 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 SLC39A2Q9NP94 309 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 ZNF277Q9NRM2 450 aaPredicted RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 PHLPP2Q6ZVD8 1323 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 SMCHD1A6NHR9 2005 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 EEF1GP26641 437 aaKnown RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 IKQ13123 557 aaPredicted RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 USH1GQ495M9 461 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 CCDC93Q567U6 631 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 CNNM4Q6P4Q7 775 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 SPICE1Q8N0Z3 855 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 GLT8D2Q9H1C3 349 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEC13-216ENST00000479868 PCDHA12Q9UN75 941 aa14.56□□□□□ -0.08
SEC13-216ENST00000479868 ZBTB12Q9Y330 459 aaPredicted RBP14.56□□□□□ -0.08
SEC13-216ENST00000479868 SYDE2Q5VT97 1194 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 LARGE2Q8N3Y3 721 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 GMLQ99445 158 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 AMNQ9BXJ7 453 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 MRPL44Q9H9J2 332 aaKnown RBP14.55□□□□□ -0.08
SEC13-216ENST00000479868 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC13-216ENST00000479868 V9GYY5 206 aaPredicted RBP14.55□□□□□ -0.08
SEC13-216ENST00000479868 LGALS16A8MUM7 142 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 MARCH6O60337 910 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 SLU7O95391 586 aaKnown RBP14.55□□□□□ -0.08
SEC13-216ENST00000479868 VIL1P09327 827 aaKnown RBP14.55□□□□□ -0.08
SEC13-216ENST00000479868 BMP3P12645 472 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 KCNA3P22001 575 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 FECHP22830 423 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 ECE1P42892 770 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 TMEM132AQ24JP5 1023 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 UNC13DQ70J99 1090 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 ZNF507Q8TCN5 953 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 PSMD1Q99460 953 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 ARID3AQ99856 593 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 ABHD10Q9NUJ1 306 aa14.55□□□□□ -0.08
SEC13-216ENST00000479868 BICDL2A1A5D9 508 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
SEC13-216ENST00000479868 TPM1P09493 284 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 USP11P51784 963 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 COBLL1Q53SF7 1204 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 RTKN2Q8IZC4 609 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 MB21D1Q8N884 522 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 LRRN4CLQ8ND94 238 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 CRYGNQ8WXF5 182 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 DDX12PQ92771 950 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 CCDC51Q96ER9 411 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 WDR24Q96S15 920 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 KCNMB3Q9NPA1 279 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 TMOD2Q9NZR1 351 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 MAGEC2Q9UBF1 373 aaPredicted RBP14.54□□□□□ -0.08
SEC13-216ENST00000479868 ZNF70Q9UC06 446 aaPredicted RBP14.54□□□□□ -0.08
SEC13-216ENST00000479868 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
SEC13-216ENST00000479868 ADGRG1Q9Y653 693 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 A0A0U1RQJ8 604 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 PVALEFA0A1B0GWK0 134 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 GOLGA6L9A6NEM1 432 aa14.54□□□□□ -0.08
SEC13-216ENST00000479868 NKRFO15226 690 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC13-216ENST00000479868 CCDC175P0C221 793 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms