RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 CABP7Q86V35 215 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 IQCKQ8N0W5 287 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 CCDC47Q96A33 483 aaKnown RBP22.94■■□□□ 1.26
COL13A1-208ENST00000479733 NDST4Q9H3R1 872 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 SEMA6BQ9H3T3 888 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 NLRC4Q9NPP4 1024 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 PCDHA4Q9UN74 947 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 IGHMBP2P38935 993 aaKnown RBP22.94■■□□□ 1.26
COL13A1-208ENST00000479733 HEATR3Q7Z4Q2 680 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 PROCA1Q8NCQ7 364 aaPredicted RBP22.94■■□□□ 1.26
COL13A1-208ENST00000479733 CCT8L2Q96SF2 557 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 TANGO6Q9C0B7 1094 aa22.94■■□□□ 1.26
COL13A1-208ENST00000479733 GSCP56915 257 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-208ENST00000479733 CDK17Q00537 523 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 ZNF572Q7Z3I7 529 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-208ENST00000479733 SLC4A9Q96Q91 983 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 TNS2Q63HR2 1409 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 VWA3BQ502W6 1294 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 CACNA2D4Q7Z3S7 1137 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 NOX5Q96PH1 765 aa22.93■■□□□ 1.26
COL13A1-208ENST00000479733 A0A1W2PQJ5 194 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PPP1R37O75864 691 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PTPROQ16827 1216 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 CEP85LQ5SZL2 805 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 TCP11L1Q9NUJ3 509 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PTGISQ16647 500 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 KDM7AQ6ZMT4 941 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 ZSCAN29Q8IWY8 852 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-208ENST00000479733 KLHL7Q8IXQ5 586 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 KIAA0895Q8NCT3 520 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PIK3R5Q8WYR1 880 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 SIK3Q9Y2K2 1263 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 BACH1O14867 736 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 ARID5AQ03989 594 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 SF3B2Q13435 895 aaKnown RBP22.92■■□□□ 1.26
COL13A1-208ENST00000479733 NLRP14Q86W24 1093 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 CASKIN2Q8WXE0 1202 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PCDHA6Q9UN73 950 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 PCDHA8Q9Y5H6 950 aa22.92■■□□□ 1.26
COL13A1-208ENST00000479733 ALS2Q96Q42 1657 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 A0A0G2JS52 829 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 EVA1CP58658 441 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 PAK2Q13177 524 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 LETM2Q2VYF4 491 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 DYMQ7RTS9 669 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 OR2W6PQ8NHA6 318 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 UBR2Q8IWV8 1755 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 BAZ2AQ9UIF9 1905 aaKnown RBP22.91■■□□□ 1.26
COL13A1-208ENST00000479733 PALMO75781 387 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
COL13A1-208ENST00000479733 ATP6V1AP38606 617 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 TECP42680 631 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 HLTFQ14527 1009 aaKnown RBP eCLIP22.91■■□□□ 1.26
COL13A1-208ENST00000479733 FIGNQ5HY92 759 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 MYCBPAPQ8TBZ2 947 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 CCSER1Q9C0I3 900 aa22.91■■□□□ 1.26
COL13A1-208ENST00000479733 FSBPO95073 299 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 SSBP05455 408 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL13A1-208ENST00000479733 MICALCLQ6ZW33 695 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 BCCIPQ9P287 314 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL13A1-208ENST00000479733 EHHADHQ08426 723 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 ZNF384Q8TF68 577 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 CPVLQ9H3G5 476 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 PLAAQ9Y263 795 aa22.9■■□□□ 1.26
COL13A1-208ENST00000479733 MDH1P40925 334 aaKnown RBP22.89■■□□□ 1.26
COL13A1-208ENST00000479733 ACTN3Q08043 901 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-208ENST00000479733 RUBCNQ92622 972 aa22.89■■□□□ 1.26
COL13A1-208ENST00000479733 GDF3Q9NR23 364 aa22.89■■□□□ 1.26
COL13A1-208ENST00000479733 A6NNZ2 444 aa22.89■■□□□ 1.25
COL13A1-208ENST00000479733 CCNT1O60563 726 aaKnown RBP22.89■■□□□ 1.25
COL13A1-208ENST00000479733 ATP2C2O75185 946 aa22.89■■□□□ 1.25
COL13A1-208ENST00000479733 TUBB8Q3ZCM7 444 aa22.89■■□□□ 1.25
COL13A1-208ENST00000479733 ATP6V1G3Q96LB4 118 aa22.89■■□□□ 1.25
COL13A1-208ENST00000479733 HNRNPH3P31942 346 aaKnown RBP22.88■■□□□ 1.25
COL13A1-208ENST00000479733 KIF5BP33176 963 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 JAG2Q9Y219 1238 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 MYL1P05976 194 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 LRRC41Q15345 812 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC13Q8IYE1 715 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.88■■□□□ 1.25
COL13A1-208ENST00000479733 RDXP35241 583 aaKnown RBP22.88■■□□□ 1.25
COL13A1-208ENST00000479733 KANSL2Q9H9L4 492 aa22.88■■□□□ 1.25
COL13A1-208ENST00000479733 HSPA2P54652 639 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC40Q4G0X9 1142 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 RCSD1Q6JBY9 416 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 KLC4Q9NSK0 619 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 FLT1P17948 1338 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 GOLGA8HP0CJ92 632 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 GLE1Q53GS7 698 aaKnown RBP22.87■■□□□ 1.25
COL13A1-208ENST00000479733 BAP1Q92560 729 aa22.87■■□□□ 1.25
COL13A1-208ENST00000479733 RAD51CO43502 376 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC172P0C7W6 258 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 CNNM4Q6P4Q7 775 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 ZKSCAN4Q969J2 545 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-208ENST00000479733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.86■■□□□ 1.25
COL13A1-208ENST00000479733 TMOD1P28289 359 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 TNFRSF8P28908 595 aa22.86■■□□□ 1.25
COL13A1-208ENST00000479733 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms