RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 ARHGEF16Q5VV41 709 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 MB21D2Q8IYB1 491 aaPredicted RBP17.48■□□□□ 0.39
PRKN-207ENST00000479615 DEFB123Q8N688 67 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 OR6J1Q8NGC5 347 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
PRKN-207ENST00000479615 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 DDAH1O94760 285 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 CFBP00751 764 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 CALM1P0DP23 149 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 CALM2P0DP24 149 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 CALM3P0DP25 149 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 ITGB8P26012 769 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 GNAQP50148 359 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 SMAD3P84022 425 aaKnown RBP17.47■□□□□ 0.39
PRKN-207ENST00000479615 KCNV1Q6PIU1 500 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
PRKN-207ENST00000479615 TAAR1Q96RJ0 339 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 MTG1Q9BT17 334 aaPredicted RBP17.47■□□□□ 0.39
PRKN-207ENST00000479615 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
PRKN-207ENST00000479615 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
PRKN-207ENST00000479615 LIFRP42702 1097 aa17.46■□□□□ 0.39
PRKN-207ENST00000479615 PURAQ00577 322 aaKnown RBP17.46■□□□□ 0.39
PRKN-207ENST00000479615 STOX1Q6ZVD7 989 aa17.46■□□□□ 0.39
PRKN-207ENST00000479615 ANO2Q9NQ90 1003 aa17.46■□□□□ 0.39
PRKN-207ENST00000479615 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
PRKN-207ENST00000479615 NR3C2P08235 984 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
PRKN-207ENST00000479615 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 C9orf50Q5SZB4 431 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
PRKN-207ENST00000479615 PXMP2Q9NR77 195 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
PRKN-207ENST00000479615 LTBP2Q14767 1821 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 TMEM265A0A087WTH1 108 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 SLC27A2O14975 620 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 PRC1O43663 620 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 GH1P01241 217 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 ANTXR2P58335 489 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 TMEM63BQ5T3F8 832 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 NFRKBQ6P4R8 1299 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 CCDC62Q6P9F0 684 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 PSRC1Q6PGN9 363 aaPredicted RBP17.44■□□□□ 0.38
PRKN-207ENST00000479615 CHST3Q7LGC8 479 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 PIGSQ96S52 555 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 SPZ1Q9BXG8 430 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
PRKN-207ENST00000479615 MTIF3Q9H2K0 278 aaKnown RBP17.44■□□□□ 0.38
PRKN-207ENST00000479615 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 MTMR10Q9NXD2 777 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 GRIN2DO15399 1336 aa17.44■□□□□ 0.38
PRKN-207ENST00000479615 MYL3P08590 195 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 TGFB3P10600 412 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
PRKN-207ENST00000479615 ZNF697Q5TEC3 545 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 NFXL1Q6ZNB6 911 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 SEPT14Q6ZU15 432 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 RPUSD2Q8IZ73 545 aaKnown RBP17.43■□□□□ 0.38
PRKN-207ENST00000479615 ZNF654Q8IZM8 581 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 EMID1Q96A84 441 aaPredicted RBP17.43■□□□□ 0.38
PRKN-207ENST00000479615 RRP36Q96EU6 259 aaKnown RBP17.43■□□□□ 0.38
PRKN-207ENST00000479615 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
PRKN-207ENST00000479615 STXBP5LQ9Y2K9 1186 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 LRRC37A2A6NM11 1700 aa17.43■□□□□ 0.38
PRKN-207ENST00000479615 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.42■□□□□ 0.38
PRKN-207ENST00000479615 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.42■□□□□ 0.38
PRKN-207ENST00000479615 OPLAHO14841 1288 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 CYTH3O43739 400 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
PRKN-207ENST00000479615 STAM2O75886 525 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
PRKN-207ENST00000479615 LAMC2Q13753 1193 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 VSIG10LQ86VR7 867 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 SENP2Q9HC62 589 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
PRKN-207ENST00000479615 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 LCTP09848 1927 aa17.42■□□□□ 0.38
PRKN-207ENST00000479615 SH2B2O14492 632 aaPredicted RBP17.41■□□□□ 0.38
PRKN-207ENST00000479615 B4GALT4O60513 344 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 CDC45O75419 566 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 EPHB4P54760 987 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 PSMC6P62333 389 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 KRT32Q14532 448 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 DGKDQ16760 1214 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 TSGA10IPQ3SY00 556 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 TEX2Q8IWB9 1127 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 IL23AQ9NPF7 189 aa17.41■□□□□ 0.38
PRKN-207ENST00000479615 ARIH2O95376 493 aa17.4■□□□□ 0.38
PRKN-207ENST00000479615 PFKMP08237 780 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms