RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NDOR1Q9UHB4 597 aa7.08□□□□□ -1.28
RFC4-212ENST00000479307 ANGEL1Q9UNK9 670 aaKnown RBP7.08□□□□□ -1.28
RFC4-212ENST00000479307 TM4SF20Q53R12 229 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 WFDC3Q8IUB2 231 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 DIO2Q92813 273 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 ALPK1Q96QP1 1244 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 SLC52A2Q9HAB3 445 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 SPC25Q9HBM1 224 aa7.07□□□□□ -1.28
RFC4-212ENST00000479307 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
RFC4-212ENST00000479307 UHRF1BP1LA0JNW5 1464 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 BLACEA4D250 179 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 DNAJC6O75061 913 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 MED26O95402 600 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 KIR2DL1P43626 348 aaPredicted RBP7.06□□□□□ -1.28
RFC4-212ENST00000479307 KIR2DL2P43627 348 aaPredicted RBP7.06□□□□□ -1.28
RFC4-212ENST00000479307 BRAPQ7Z569 592 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 CCDC103Q8IW40 242 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 FLCNQ8NFG4 579 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.06□□□□□ -1.281e-323■■■■■ 75.4
RFC4-212ENST00000479307 LINC01599Q8WXQ3 324 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 MAP6Q96JE9 813 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 PHF20Q9BVI0 1012 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 TRIM39Q9HCM9 518 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 TMEM59LQ9UK28 342 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 CFAP43Q8NDM7 1665 aa7.06□□□□□ -1.28
RFC4-212ENST00000479307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.05□□□□□ -1.28
RFC4-212ENST00000479307 MYO1BO43795 1136 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 FUT4P22083 530 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 SSTR4P31391 388 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 CD96P40200 585 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 GTF2A2P52657 109 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 GPR85P60893 370 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 SLC23A3Q6PIS1 610 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 ZPBP2Q6X784 338 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 SPRED2Q7Z698 418 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 FILIP1Q7Z7B0 1213 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 AGBL5Q8NDL9 886 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 SLC7A14Q8TBB6 771 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 ZCRB1Q8TBF4 217 aaKnown RBP7.05□□□□□ -1.28
RFC4-212ENST00000479307 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
RFC4-212ENST00000479307 G6PC3Q9BUM1 346 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 BRINP2Q9C0B6 783 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 TMEFF2Q9UIK5 374 aaPredicted RBP7.05□□□□□ -1.28
RFC4-212ENST00000479307 MAGI3Q5TCQ9 1506 aa7.05□□□□□ -1.28
RFC4-212ENST00000479307 RIMS1Q86UR5 1692 aaKnown RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 SCO2A0A1W2PP80 73 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 A0A1W2PQ45 241 aaPredicted RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 A0A1W2PQY0 241 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 FADS2P1A8MWK0 482 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 VIL1P09327 827 aaKnown RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 ZGLP1P0C6A0 271 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 MASP1P48740 699 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 CHRNEQ04844 493 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 LAPTM5Q13571 262 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 ZNF574Q6ZN55 896 aaPredicted RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 TMEM52Q8NDY8 209 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 PAK6Q9NQU5 681 aaPredicted RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 TRAF6Q9Y4K3 522 aa7.04□□□□□ -1.28
RFC4-212ENST00000479307 ZCCHC11Q5TAX3 1644 aaKnown RBP7.04□□□□□ -1.28
RFC4-212ENST00000479307 WRNQ14191 1432 aaPredicted RBP eCLIP7.03□□□□□ -1.28
RFC4-212ENST00000479307 KDM5BQ9UGL1 1544 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 B4E1Z4 1266 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 ARNTLO00327 626 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 IRS4O14654 1257 aaPredicted RBP7.03□□□□□ -1.28
RFC4-212ENST00000479307 ASLP04424 464 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 IGFALSP35858 605 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 CORO7P57737 925 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 LBX2Q6XYB7 198 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 SPPL2CQ8IUH8 684 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 DHX37Q8IY37 1157 aaKnown RBP7.03□□□□□ -1.28
RFC4-212ENST00000479307 PDZD8Q8NEN9 1154 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
RFC4-212ENST00000479307 ALG1Q9BT22 464 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 PCMTD2Q9NV79 361 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 IFT57Q9NWB7 429 aa7.03□□□□□ -1.28
RFC4-212ENST00000479307 BIVM-ERCC5R4GMW8 1640 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 NPHS1O60500 1241 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 DNAJC8O75937 253 aaPredicted RBP7.02□□□□□ -1.29
RFC4-212ENST00000479307 WNT11O96014 354 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 RPL11P62913 178 aaKnown RBP7.02□□□□□ -1.29
RFC4-212ENST00000479307 PTPROQ16827 1216 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 INF2Q27J81 1249 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 KIZQ2M2Z5 673 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 RALGPS1Q5JS13 557 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 NFXL1Q6ZNB6 911 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 KRT26Q7Z3Y9 468 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 MTDHQ86UE4 582 aaKnown RBP7.02□□□□□ -1.29
RFC4-212ENST00000479307 SLCO6A1Q86UG4 719 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 LRRTM3Q86VH5 581 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 CPNE8Q86YQ8 564 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 JAMLQ86YT9 394 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 PPM1KQ8N3J5 372 aa7.02□□□□□ -1.29
RFC4-212ENST00000479307 OXR1Q8N573 874 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms