RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 IQSEC1Q6DN90 963 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 HERC6Q8IVU3 1022 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 RPUSD2Q8IZ73 545 aaKnown RBP7.85□□□□□ -1.15
VCP-205ENST00000479300 TRERF1Q96PN7 1200 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 AP5M1Q9H0R1 490 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 CYP39A1Q9NYL5 469 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 Q9Y3F1 56 aa7.85□□□□□ -1.15
VCP-205ENST00000479300 WDFY4Q6ZS81 3184 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 ASB14A6NK59 587 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 PI4K2BG5E9Z4 385 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 FOXP2O15409 715 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 TTLL1O95922 423 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 IQCF3P0C7M6 154 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 ALAS1P13196 640 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
VCP-205ENST00000479300 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 DUSP28Q4G0W2 176 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 IFNL3Q8IZI9 196 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 NEDD1Q8NHV4 660 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 GDPD5Q8WTR4 605 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 HLA-CQ95604 372 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 EVI5LQ96CN4 794 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 GMCL1Q96IK5 515 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 INCENPQ9NQS7 918 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 SYNPO2Q9UMS6 1093 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 COG5Q9UP83 839 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 HCN4Q9Y3Q4 1203 aa7.84□□□□□ -1.15
VCP-205ENST00000479300 TRIOO75962 3097 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 RBM47A0AV96 593 aaKnown RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 NFIBO00712 420 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 NMT2O60551 498 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 PFKMP08237 780 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 MYL3P08590 195 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 MCCP23508 829 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 STAT2P52630 851 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 MFAP1P55081 439 aaKnown RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 DEFB103AP81534 67 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 HDAC1Q13547 482 aaPredicted RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 KIAA1211Q6ZU35 1233 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 ALYREFQ86V81 257 aaKnown RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 PI4K2BQ8TCG2 481 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 COPS5Q92905 334 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 SLC9A7Q96T83 725 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
VCP-205ENST00000479300 SEZ6LQ9BYH1 1024 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 VTA1Q9NP79 307 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 IL17RBQ9NRM6 502 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 TOMM22Q9NS69 142 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 PRR12Q9ULL5 1215 aa7.83□□□□□ -1.16
VCP-205ENST00000479300 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.82□□□□□ -1.16
VCP-205ENST00000479300 TSPY2A6NKD2 308 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 ZEB2O60315 1214 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 PLA2G6O60733 806 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 FDX1P10109 184 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 FXR2P51116 673 aaKnown RBP eCLIP7.82□□□□□ -1.162e-6■■■□□ 18.3
VCP-205ENST00000479300 ALDH5A1P51649 535 aaPredicted RBP7.82□□□□□ -1.16
VCP-205ENST00000479300 WDR5P61964 334 aaKnown RBP7.82□□□□□ -1.16
VCP-205ENST00000479300 TFAP4Q01664 338 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 PPARAQ07869 468 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 BAATQ14032 418 aaPredicted RBP7.82□□□□□ -1.16
VCP-205ENST00000479300 TKFCQ3LXA3 575 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 NSMFQ6X4W1 530 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 SLC30A10Q6XR72 485 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 FAM160B2Q86V87 743 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 PHOSPHO2Q8TCD6 241 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 ANKS1AQ92625 1134 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 RILPL2Q969X0 211 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 MTG1Q9BT17 334 aaPredicted RBP7.82□□□□□ -1.16
VCP-205ENST00000479300 WDR11Q9BZH6 1224 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 HELLSQ9NRZ9 838 aa7.82□□□□□ -1.16
VCP-205ENST00000479300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
VCP-205ENST00000479300 TRIP12Q14669 1992 aaPredicted RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 A6NJR5 290 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 RANBP6O60518 1105 aaKnown RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 NBNO60934 754 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 ARIH2O95376 493 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 SUPT20HL2P0C7V6 817 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 RFC2P35250 354 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 SLC1A4P43007 532 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 NOVP48745 357 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 PDE1AP54750 535 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 FAM47CQ5HY64 1035 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 RCSD1Q6JBY9 416 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 TRAF7Q6Q0C0 670 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 FAM178BQ8IXR5 827 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 OR6J1Q8NGC5 347 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 OTUD7AQ8TE49 926 aaPredicted RBP7.81□□□□□ -1.16
VCP-205ENST00000479300 CHURC1Q8WUH1 139 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 CLEC4DQ8WXI8 215 aa7.81□□□□□ -1.16
VCP-205ENST00000479300 WNT8BQ93098 351 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms