RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 YIPF4Q9BSR8 244 aa2.39□□□□□ -2.03
SRRM1-211ENST00000478890 CCSER2Q9H7U1 834 aa2.39□□□□□ -2.03
SRRM1-211ENST00000478890 GULP1Q9UBP9 304 aa2.39□□□□□ -2.03
SRRM1-211ENST00000478890 DDX41Q9UJV9 622 aaKnown RBP2.39□□□□□ -2.03
SRRM1-211ENST00000478890 ZNF214Q9UL59 606 aaPredicted RBP2.39□□□□□ -2.03
SRRM1-211ENST00000478890 DIS3Q9Y2L1 958 aaKnown RBP2.39□□□□□ -2.03
SRRM1-211ENST00000478890 PCDHA5Q9Y5H7 936 aa2.39□□□□□ -2.03
SRRM1-211ENST00000478890 HCFC2Q9Y5Z7 792 aa2.39□□□□□ -2.03
SRRM1-211ENST00000478890 C2orf71A6NGG8 1288 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 AURKAO14965 403 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 CBFA2T2O43439 604 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 SMARCA5O60264 1052 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 NPHS1O60500 1241 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 VAMP4O75379 141 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 KCNH1O95259 989 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 FUCA1P04066 466 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 NCAM1P13591 858 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 NASPP49321 788 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 GJA9P57773 515 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 TGFB2P61812 414 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 RACK1P63244 317 aaKnown RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 RBM10P98175 930 aaKnown RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 FOXO4P98177 505 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 CBX2Q14781 532 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 ANKRD39Q53RE8 183 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 UBXN11Q5T124 520 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 NT5DC1Q5TFE4 455 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 RCSD1Q6JBY9 416 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 KIAA1211LQ6NV74 962 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 POMZP3Q6PJE2 187 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 NT5DC4Q86YG4 428 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 TMEFF1Q8IYR6 380 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 RBBP8NLQ8NC74 664 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 TMEM52Q8NDY8 209 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 VOPP1Q96AW1 172 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 ANAPC16Q96DE5 110 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 PEX11GQ96HA9 241 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 BRIP1Q9BX63 1249 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 RNF38Q9H0F5 515 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 AP5M1Q9H0R1 490 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 BCAS3Q9H6U6 928 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 LRP2BPQ9P2M1 347 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 CGGBP1Q9UFW8 167 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 AKT3Q9Y243 479 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 INPP5FQ9Y2H2 1132 aa2.38□□□□□ -2.03
SRRM1-211ENST00000478890 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.38□□□□□ -2.03
SRRM1-211ENST00000478890 A0A087WZG4 1122 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 A0A1B0GTL3 188 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 ANKRD34BA5PLL1 514 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 MYO1BO43795 1136 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 SSBP05455 408 aaKnown RBP eCLIP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 CYP2C8P10632 490 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 ZNF20P17024 532 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 PMLP29590 882 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 SLURP1P55000 103 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 SCRN1Q12765 414 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 TRIM26Q12899 539 aaPredicted RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 GRB10Q13322 594 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 C9orf131Q5VYM1 1079 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 LARP1BQ659C4 914 aaKnown RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 WWC2Q6AWC2 1192 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 TTLL7Q6ZT98 887 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 DCP2Q8IU60 420 aaKnown RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 ADGRG2Q8IZP9 1017 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 C19orf47Q8N9M1 422 aaKnown RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 SMARCC2Q8TAQ2 1214 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 ZBTB8AQ96BR9 441 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 MRRFQ96E11 262 aaKnown RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 SPATA25Q9BR10 227 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 KRTAP3-1Q9BYR8 98 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 KLHL25Q9H0H3 589 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 EPB41L4AQ9HCS5 686 aaPredicted RBP2.37□□□□□ -2.03
SRRM1-211ENST00000478890 MARCH2Q9P0N8 246 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 NTMQ9P121 344 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 CLEC1BQ9P126 229 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 LTBP3Q9NS15 1303 aa2.37□□□□□ -2.03
SRRM1-211ENST00000478890 A0A1W2PQH9 124 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 FFAR3O14843 346 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 PPFIA2O75334 1257 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 PLA2G1BP04054 148 aaKnown RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 NTRK1P04629 796 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 ASGR2P07307 311 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 GLI4P10075 376 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 ATF2P15336 505 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 CNR2P34972 360 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 KCNJ6P48051 423 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 SOX9P48436 509 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 NANOS3P60323 173 aaKnown RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 KLF10Q13118 480 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 SMAD4Q13485 552 aaKnown RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 SLC9A5Q14940 896 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 SV2CQ496J9 727 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 LDLRAD1Q5T700 205 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 LIPIQ6XZB0 460 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 ZC3H18Q86VM9 953 aaKnown RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 GLCCI1Q86VQ1 547 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 NETO2Q8NC67 525 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 FNIP1Q8TF40 1166 aa2.36□□□□□ -2.03
SRRM1-211ENST00000478890 DDX1Q92499 740 aaKnown RBP2.36□□□□□ -2.03
SRRM1-211ENST00000478890 ZNF764Q96H86 408 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms