RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 BTBD18B2RXH4 712 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 CNMDO75829 334 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 F13A1P00488 732 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 COL6A1P12109 1028 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 CALML3P27482 149 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 TRAF1Q13077 416 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 RESTQ13127 1097 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 NR5A1Q13285 461 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 NPY5RQ15761 445 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 UBE2SQ16763 222 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.26
PDCD11-204ENST00000478543 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.26
PDCD11-204ENST00000478543 BLIDQ8IZY5 108 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 MB21D1Q8N884 522 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 RASGRP4Q8TDF6 673 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 TRIB2Q92519 343 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 TXNRD2Q9NNW7 524 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 ZNF214Q9UL59 606 aaPredicted RBP13.4□□□□□ -0.26
PDCD11-204ENST00000478543 OGDHLQ9ULD0 1010 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
PDCD11-204ENST00000478543 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
PDCD11-204ENST00000478543 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 HMGCRP04035 888 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
PDCD11-204ENST00000478543 CAPN2P17655 700 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 GNA11P29992 359 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 STAT3P40763 770 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 OAZ1P54368 228 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 MUM1L1Q5H9M0 696 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
PDCD11-204ENST00000478543 CUL5Q93034 780 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 RNF146Q9NTX7 359 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 RBPJLQ9UBG7 517 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 RIPK3Q9Y572 518 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
PDCD11-204ENST00000478543 NFIBO00712 420 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 OPLAHO14841 1288 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 MAP3K21Q5TCX8 1036 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 JAKMIP3Q5VZ66 844 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 FAM177A1Q8N128 213 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-204ENST00000478543 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 RGS22Q8NE09 1264 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 BICD2Q8TD16 824 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-204ENST00000478543 CDX2Q99626 313 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-204ENST00000478543 SPATC1LQ9H0A9 340 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-204ENST00000478543 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 PNMA2Q9UL42 364 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 RABGAP1Q9Y3P9 1069 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 REV3LO60673 3130 aa13.38□□□□□ -0.27
PDCD11-204ENST00000478543 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 CFBP00751 764 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 HOXA13P31271 388 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 ERVK-9P63128 1117 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 ERVK-24P63145 666 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 Q3C1V9 767 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 TKFCQ3LXA3 575 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 GALNT17Q6IS24 598 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 CLEC4DQ8WXI8 215 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 PGBD1Q96JS3 809 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 MOV10L1Q9BXT6 1211 aaKnown RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 FOXP1Q9H334 677 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-204ENST00000478543 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 TTC28Q96AY4 2481 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
PDCD11-204ENST00000478543 U2AF2P26368 475 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDCD11-204ENST00000478543 EARS2Q5JPH6 523 aaKnown RBP13.36□□□□□ -0.27
PDCD11-204ENST00000478543 WDR78Q5VTH9 848 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 PIK3AP1Q6ZUJ8 805 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 NOSTRINQ8IVI9 506 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
PDCD11-204ENST00000478543 TNFRSF25Q93038 417 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 GLT8D2Q9H1C3 349 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
PDCD11-204ENST00000478543 CCDC194A0A1B0GVG4 234 aa13.35□□□□□ -0.27
PDCD11-204ENST00000478543 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms