RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 LARGE1O95461 756 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 ZNF865P0CJ78 1059 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-215ENST00000478531 AKR1A1P14550 325 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 SCRN1Q12765 414 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 UBE2SQ16763 222 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 USP17L6PQ6QN14 398 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 DNERQ8NFT8 737 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 NSUN6Q8TEA1 469 aaKnown RBP7.94□□□□□ -1.14
BRCA1-215ENST00000478531 KIF2CQ99661 725 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 BACH2Q9BYV9 841 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 ALDH8A1Q9H2A2 487 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-215ENST00000478531 ABHD16BQ9H3Z7 469 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 PSTPIP2Q9H939 334 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 ALPK3Q96L96 1907 aa7.94□□□□□ -1.14
BRCA1-215ENST00000478531 STXBP3O00186 592 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 MSCO60682 206 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 FARP2O94887 1054 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 RARBP10826 455 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 MYCLP12524 364 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 SCG2P13521 617 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 IFNAR1P17181 557 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 NTRK3Q16288 839 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 ME3Q16798 604 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PFKFB3Q16875 520 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 LHX8Q68G74 356 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 TYW1BQ6NUM6 668 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 CPLX2Q6PUV4 134 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 NECAB1Q8N987 351 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 DIS3LQ8TF46 1054 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 TBC1D32Q96NH3 1257 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PXMP2Q9NR77 195 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PDGFCQ9NRA1 345 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 NRBP1Q9UHY1 535 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 LAMA2P24043 3122 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 B4DLN1 442 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 ADCY6O43306 1168 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PRPF3O43395 683 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PFKFB2O60825 505 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PGK1P00558 417 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PTGS1P23219 599 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 ADCYAP1R1P41586 468 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 ADCY7P51828 1080 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 MRPL12P52815 198 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 RABEP1Q15276 862 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 IL31RAQ8NI17 732 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 RNF26Q9BY78 433 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 KATNBL1Q9H079 304 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 CRISPLD2Q9H0B8 497 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 VTA1Q9NP79 307 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 XPNPEP3Q9NQH7 507 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 BARHL2Q9NY43 387 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
BRCA1-215ENST00000478531 FAM184BQ9ULE4 1060 aa7.93□□□□□ -1.14
BRCA1-215ENST00000478531 SMCO2A6NFE2 343 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 hCG_1984214I3L0E3 225 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 MEIS2O14770 477 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 CDKL5O76039 1030 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 EDNRBP24530 442 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 GHRHRQ02643 423 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 PGM5Q15124 567 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 PKN1Q16512 942 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 GJC2Q5T442 439 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-215ENST00000478531 SEPT14Q6ZU15 432 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 ZNF713Q8N859 430 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-215ENST00000478531 MORC4Q8TE76 937 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 GTF3C6Q969F1 213 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 ZFP91Q96JP5 570 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-215ENST00000478531 PGBD1Q96JS3 809 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 PDCD2LQ9BRP1 358 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 MAF1Q9H063 256 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 MAP3K20Q9NYL2 800 aaKnown RBP7.92□□□□□ -1.14
BRCA1-215ENST00000478531 VPS54Q9P1Q0 977 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 OGDHLQ9ULD0 1010 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 SYNRGQ9UMZ2 1314 aa7.92□□□□□ -1.14
BRCA1-215ENST00000478531 LOC102724159A0A0B4J2E5 919 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 KBTBD13C9JR72 458 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 PIK3CDO00329 1044 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 ST18O60284 1047 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 NR3C2P08235 984 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 CCND2P30279 289 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 TNFAIP2Q03169 654 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 PWP2Q15269 919 aaKnown RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 STXBP2Q15833 593 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 TMEM63BQ5T3F8 832 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 TAPT1Q6NXT6 567 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 TLK2Q86UE8 772 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 SAMD3Q8N6K7 520 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 CCDC12Q8WUD4 166 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 PAWRQ96IZ0 340 aaKnown RBP7.91□□□□□ -1.14
BRCA1-215ENST00000478531 AIFM3Q96NN9 605 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 IWS1Q96ST2 819 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 WDR11Q9BZH6 1224 aa7.91□□□□□ -1.14
BRCA1-215ENST00000478531 RIC8AQ9NPQ8 531 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms