RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PSMC6P62333 389 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 PTPN11Q06124 597 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 STXBP2Q15833 593 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 FAM47CQ5HY64 1035 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 ZNF365Q70YC5 407 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 HERVK_113Q902F9 699 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 AMNQ9BXJ7 453 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 NOD1Q9Y239 953 aa16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.28
SMARCE1-209ENST00000478349 LAMA4Q16363 1823 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 A6NJR5 290 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 NFRKBQ6P4R8 1299 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 SAMD3Q8N6K7 520 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 CCDC155Q8N6L0 562 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 MYLIPQ8WY64 445 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 RMDN3Q96TC7 470 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 GAS2L1Q99501 681 aaPredicted RBP16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 MAP3K20Q9NYL2 800 aaKnown RBP16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 MCM3APO60318 1980 aa16.82■□□□□ 0.28
SMARCE1-209ENST00000478349 GH1P01241 217 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 ACRP10323 421 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 ACTN1P12814 892 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 RFC2P35250 354 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 ARHGEF16Q5VV41 709 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 RETREG2Q8NC44 543 aa16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 SYTL5Q8TDW5 730 aaPredicted RBP16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 SUPT16HQ9Y5B9 1047 aaKnown RBP16.81■□□□□ 0.28
SMARCE1-209ENST00000478349 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 KLRF2D3W0D1 207 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 CCL23P55773 120 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 BFSP2Q13515 415 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 CPVLQ9H3G5 476 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 VAT1LQ9HCJ6 419 aa16.8■□□□□ 0.28
SMARCE1-209ENST00000478349 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 IFIT3O14879 490 aaKnown RBP16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 ZBTB5O15062 677 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 EIF3JO75822 258 aaKnown RBP16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 CFBP00751 764 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 KCNV1Q6PIU1 500 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 C16orf59Q7L2K0 433 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 NCOA7Q8NI08 942 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 KATNAL1Q9BW62 490 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 SLC28A3Q9HAS3 691 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
SMARCE1-209ENST00000478349 ZBBXA8MT70 800 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 PTGS1P23219 599 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 DGKDQ16760 1214 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 TMEM63BQ5T3F8 832 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 SEPT14Q6ZU15 432 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 OTOP2Q7RTS6 562 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 TRMT13Q9NUP7 481 aaKnown RBP16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 PCDHA1Q9Y5I3 950 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 MRVI1Q9Y6F6 885 aa16.78■□□□□ 0.28
SMARCE1-209ENST00000478349 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 EIF2AK2P19525 551 aaKnown RBP16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 CHMLP26374 656 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 GHRHRQ02643 423 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 WTAPQ15007 396 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 SEC23AQ15436 765 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 CCDC62Q6P9F0 684 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 CATIPQ7Z7H3 387 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 CAGE1Q8TC20 777 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 TAAR1Q96RJ0 339 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 PXMP2Q9NR77 195 aa16.77■□□□□ 0.28
SMARCE1-209ENST00000478349 COL6A3P12111 3177 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 PARNO95453 639 aaKnown RBP16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 NR3C2P08235 984 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 MMP3P08254 477 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 CYP21A2P08686 494 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 CYP2C9P11712 490 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 PDE4AP27815 886 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 HSD17B4P51659 736 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 LAMC2Q13753 1193 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 GRM4Q14833 912 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 AFG1LQ8WV93 481 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 COPS5Q92905 334 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 EMID1Q96A84 441 aaPredicted RBP16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
SMARCE1-209ENST00000478349 LCTP09848 1927 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 SGSM2O43147 1006 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 ARIH2O95376 493 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 KIF5BP33176 963 aa16.75■□□□□ 0.27
SMARCE1-209ENST00000478349 CHMP4BP1P59074 171 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms