RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 SMARCA1P28370 1054 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 MRPL12P52815 198 aaKnown RBP26.31■■□□□ 1.8
TRAF4-211ENST00000478021 TRIM60Q495X7 471 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 ARHGEF16Q5VV41 709 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 Q6ZUG5 572 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 TMTC3Q6ZXV5 915 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 USP26Q9BXU7 913 aa26.31■■□□□ 1.8
TRAF4-211ENST00000478021 ZBTB43O43298 467 aa26.3■■□□□ 1.8
TRAF4-211ENST00000478021 ASGR1P07306 291 aa26.3■■□□□ 1.8
TRAF4-211ENST00000478021 CASTP20810 708 aaKnown RBP26.3■■□□□ 1.8
TRAF4-211ENST00000478021 GHRHRQ02643 423 aa26.3■■□□□ 1.8
TRAF4-211ENST00000478021 AP5M1Q9H0R1 490 aa26.3■■□□□ 1.8
TRAF4-211ENST00000478021 PXMP2Q9NR77 195 aa26.3■■□□□ 1.8
TRAF4-211ENST00000478021 KIAA1217Q5T5P2 1943 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 RBM47A0AV96 593 aaKnown RBP26.29■■□□□ 1.8
TRAF4-211ENST00000478021 MOXD2PA6NHM9 499 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 GOLGA8AA7E2F4 631 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 GOLGA8BA8MQT2 603 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 RPS6KB1P23443 525 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 APOBRQ0VD83 1088 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 SNX17Q15036 470 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 DUSP28Q4G0W2 176 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 PCSK9Q8NBP7 692 aaKnown RBP26.29■■□□□ 1.8
TRAF4-211ENST00000478021 STARD7Q9NQZ5 370 aa26.29■■□□□ 1.8
TRAF4-211ENST00000478021 GCOM1H8Y6P7 765 aaPredicted RBP26.28■■□□□ 1.8
TRAF4-211ENST00000478021 EPB41L2O43491 1005 aaKnown RBP26.28■■□□□ 1.8
TRAF4-211ENST00000478021 POLR2MP0CAP2 368 aa26.28■■□□□ 1.8
TRAF4-211ENST00000478021 RTN1Q16799 776 aa26.28■■□□□ 1.8
TRAF4-211ENST00000478021 FCHSD1Q86WN1 690 aa26.28■■□□□ 1.8
TRAF4-211ENST00000478021 BRF1Q92994 677 aa26.28■■□□□ 1.8
TRAF4-211ENST00000478021 MAP3K20Q9NYL2 800 aaKnown RBP26.28■■□□□ 1.8
TRAF4-211ENST00000478021 PSMA5P28066 241 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 NKX3-2P78367 333 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 PPP2R5BQ15173 497 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 FSCN1Q16658 493 aaKnown RBP26.27■■□□□ 1.8
TRAF4-211ENST00000478021 SEPT14Q6ZU15 432 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 COPS5Q92905 334 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 VTI1AQ96AJ9 217 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 IWS1Q96ST2 819 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 RBM28Q9NW13 759 aaKnown RBP26.27■■□□□ 1.8
TRAF4-211ENST00000478021 CNTNAP5Q8WYK1 1306 aa26.27■■□□□ 1.8
TRAF4-211ENST00000478021 ARIH2O95376 493 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 NR3C2P08235 984 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 MYCLP12524 364 aaPredicted RBP26.26■■□□□ 1.79
TRAF4-211ENST00000478021 STXBP2Q15833 593 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 HABP4Q5JVS0 413 aaKnown RBP26.26■■□□□ 1.79
TRAF4-211ENST00000478021 SAMD3Q8N6K7 520 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 OR6J1Q8NGC5 347 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 SCFD2Q8WU76 684 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 GLT1D1Q96MS3 346 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 RBM27Q9P2N5 1060 aaKnown RBP26.26■■□□□ 1.79
TRAF4-211ENST00000478021 Q9Y3F1 56 aa26.26■■□□□ 1.79
TRAF4-211ENST00000478021 TXNP10599 105 aaKnown RBP26.25■■□□□ 1.79
TRAF4-211ENST00000478021 CDC27P30260 824 aa26.25■■□□□ 1.79
TRAF4-211ENST00000478021 C1orf53Q5VUE5 145 aa26.25■■□□□ 1.79
TRAF4-211ENST00000478021 IL31RAQ8NI17 732 aa26.25■■□□□ 1.79
TRAF4-211ENST00000478021 GPKOWQ92917 476 aaPredicted RBP eCLIP26.25■■□□□ 1.79
TRAF4-211ENST00000478021 PDCD2LQ9BRP1 358 aa26.25■■□□□ 1.79
TRAF4-211ENST00000478021 PRDM5Q9NQX1 630 aaPredicted RBP26.25■■□□□ 1.79
TRAF4-211ENST00000478021 MAGEA10P43363 369 aaPredicted RBP26.24■■□□□ 1.79
TRAF4-211ENST00000478021 TLE2Q04725 743 aa26.24■■□□□ 1.79
TRAF4-211ENST00000478021 TTLL4Q14679 1199 aa26.24■■□□□ 1.79
TRAF4-211ENST00000478021 PGM5Q15124 567 aa26.24■■□□□ 1.79
TRAF4-211ENST00000478021 CXCL17Q6UXB2 119 aa26.24■■□□□ 1.79
TRAF4-211ENST00000478021 ZFP91Q96JP5 570 aaPredicted RBP26.24■■□□□ 1.79
TRAF4-211ENST00000478021 FAM217BQ9NTX9 383 aaPredicted RBP26.24■■□□□ 1.79
TRAF4-211ENST00000478021 DNAH12Q6ZR08 3092 aa26.24■■□□□ 1.79
TRAF4-211ENST00000478021 PQBP1O60828 265 aaKnown RBP26.23■■□□□ 1.79
TRAF4-211ENST00000478021 METAP2P50579 478 aaKnown RBP eCLIP26.23■■□□□ 1.79
TRAF4-211ENST00000478021 USP17L6PQ6QN14 398 aa26.23■■□□□ 1.79
TRAF4-211ENST00000478021 LTBP2Q14767 1821 aa26.23■■□□□ 1.79
TRAF4-211ENST00000478021 ELP1O95163 1332 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 ZEB2O60315 1214 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 MDM2Q00987 491 aaPredicted RBP26.22■■□□□ 1.79
TRAF4-211ENST00000478021 FUT2Q10981 343 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 LY6KQ17RY6 165 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 RUFY3Q7L099 469 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 HEATR3Q7Z4Q2 680 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 SH3RF1Q7Z6J0 888 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 SMARCC2Q8TAQ2 1214 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 CUL5Q93034 780 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 GDF15Q99988 308 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 PRO3102Q9H379 93 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 ZSWIM6Q9HCJ5 1215 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 PDLIM7Q9NR12 457 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 PRKAG2Q9UGJ0 569 aa26.22■■□□□ 1.79
TRAF4-211ENST00000478021 NKRFO15226 690 aaKnown RBP eCLIP26.21■■□□□ 1.795e-7■□□□□ 9.4
TRAF4-211ENST00000478021 EIF3JO75822 258 aaKnown RBP26.21■■□□□ 1.79
TRAF4-211ENST00000478021 ADD1P35611 737 aaKnown RBP26.21■■□□□ 1.79
TRAF4-211ENST00000478021 RCAN1P53805 252 aa26.21■■□□□ 1.79
TRAF4-211ENST00000478021 CCDC62Q6P9F0 684 aa26.21■■□□□ 1.79
TRAF4-211ENST00000478021 AGXT2Q9BYV1 514 aa26.21■■□□□ 1.79
TRAF4-211ENST00000478021 UPF3BQ9BZI7 483 aaKnown RBP26.21■■□□□ 1.79
TRAF4-211ENST00000478021 A0A0U1RQG5 324 aaPredicted RBP26.2■■□□□ 1.78
TRAF4-211ENST00000478021 MEIS2O14770 477 aa26.2■■□□□ 1.78
TRAF4-211ENST00000478021 CCND2P30279 289 aa26.2■■□□□ 1.78
TRAF4-211ENST00000478021 WWC2Q6AWC2 1192 aa26.2■■□□□ 1.78
TRAF4-211ENST00000478021 V9GY48 417 aaPredicted RBP26.2■■□□□ 1.78
TRAF4-211ENST00000478021 RGS20O76081 388 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 MYL3P08590 195 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms