RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.66□□□□□ -0.86
ERCC8-205ENST00000477893 RAB11FIP4Q86YS3 637 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 NUP133Q8WUM0 1156 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 MYL10Q9BUA6 226 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 PRKAG2Q9UGJ0 569 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 MCM3APO60318 1980 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 DNAH12Q6ZR08 3092 aa9.66□□□□□ -0.86
ERCC8-205ENST00000477893 WDR19Q8NEZ3 1342 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 LCE2BO14633 110 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 SLC27A2O14975 620 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 PRC1O43663 620 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 NT5C2P49902 561 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 ACLYP53396 1101 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 RPS6P62753 249 aaKnown RBP9.65□□□□□ -0.86
ERCC8-205ENST00000477893 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 COL9A3Q14050 684 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-205ENST00000477893 KCNA10Q16322 511 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 BMP2KLQ5H9B9 411 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 TLK2Q86UE8 772 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 MB21D2Q8IYB1 491 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-205ENST00000477893 ANKS1AQ92625 1134 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 LRRC2Q9BYS8 371 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 UBE2OQ9C0C9 1292 aaKnown RBP9.65□□□□□ -0.86
ERCC8-205ENST00000477893 KATNBL1Q9H079 304 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 SPC25Q9HBM1 224 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 STARD7Q9NQZ5 370 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 ADD3Q9UEY8 706 aaKnown RBP9.65□□□□□ -0.86
ERCC8-205ENST00000477893 MAD2L2Q9UI95 211 aa9.65□□□□□ -0.86
ERCC8-205ENST00000477893 LCTP09848 1927 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 ABCB11O95342 1321 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 KLRF2D3W0D1 207 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 DYNC1LI2O43237 492 aaPredicted RBP9.64□□□□□ -0.87
ERCC8-205ENST00000477893 DUSP11O75319 330 aaKnown RBP9.64□□□□□ -0.87
ERCC8-205ENST00000477893 CDC45O75419 566 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 SMPD1P17405 629 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 RXRAP19793 462 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 TLE2Q04725 743 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 PDE4DQ08499 809 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 GRM4Q14833 912 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 GNASQ5JWF2 1037 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 ANKK1Q8NFD2 765 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 TBC1D5Q92609 795 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 LBHD1Q9BQE6 289 aaPredicted RBP9.64□□□□□ -0.87
ERCC8-205ENST00000477893 ADAM33Q9BZ11 813 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 AP5M1Q9H0R1 490 aa9.64□□□□□ -0.87
ERCC8-205ENST00000477893 SMCHD1A6NHR9 2005 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 SOX1O00570 391 aaPredicted RBP9.63□□□□□ -0.87
ERCC8-205ENST00000477893 PPP1R11O60927 126 aaPredicted RBP9.63□□□□□ -0.87
ERCC8-205ENST00000477893 CFBP00751 764 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 ASGR1P07306 291 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 EIF2AK2P19525 551 aaKnown RBP9.63□□□□□ -0.87
ERCC8-205ENST00000477893 TAPT1Q6NXT6 567 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 KLHDC9Q8NEP7 349 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 LRCH3Q96II8 777 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 TCEANC2Q96MN5 208 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 PIGSQ96S52 555 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 GDF15Q99988 308 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 LY9Q9HBG7 655 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 VTA1Q9NP79 307 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
ERCC8-205ENST00000477893 TRIM43BA6NCK2 446 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 PALM3A6NDB9 673 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 CCDC69A6NI79 296 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SH2B2O14492 632 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SORBS3O60504 671 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 CLTBP09497 229 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 HOXA13P31271 388 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 MCM5P33992 734 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 GJA9P57773 515 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SNX17Q15036 470 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SLC35G1Q2M3R5 365 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 CXCL17Q6UXB2 119 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 PCSK9Q8NBP7 692 aaKnown RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 OR6J1Q8NGC5 347 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 SYTL5Q8TDW5 730 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 PPP1R13LQ8WUF5 828 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 COPS5Q92905 334 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 BADQ92934 168 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 TRIM43Q96BQ3 446 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-205ENST00000477893 GLT1D1Q96MS3 346 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 TAAR1Q96RJ0 339 aa9.62□□□□□ -0.87
ERCC8-205ENST00000477893 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms