RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 CCDC196A0A1B0GTZ2 297 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 ZBTB43O43298 467 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
NIFK-205ENST00000477693 PLEKHA8P1O95397 391 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 RXRAP19793 462 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 PSEN1P49768 467 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
NIFK-205ENST00000477693 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 SAMD3Q8N6K7 520 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
NIFK-205ENST00000477693 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
NIFK-205ENST00000477693 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 LCTP09848 1927 aa11.31□□□□□ -0.6
NIFK-205ENST00000477693 NID2Q14112 1375 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 OPLAHO14841 1288 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 AKR1A1P14550 325 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 CALML3P27482 149 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
NIFK-205ENST00000477693 ALDH5A1P51649 535 aaPredicted RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 HSD17B4P51659 736 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 PDAP1Q13442 181 aaKnown RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 TOB2Q14106 344 aaPredicted RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 RTN1Q16799 776 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 BRF1Q92994 677 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 MAP3K20Q9NYL2 800 aaKnown RBP11.3□□□□□ -0.6
NIFK-205ENST00000477693 KIF3AQ9Y496 699 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
NIFK-205ENST00000477693 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 GOLGA8BA8MQT2 603 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 PFKFB2O60825 505 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 RARBP10826 455 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 EDNRBP24530 442 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
NIFK-205ENST00000477693 FAM184BQ9ULE4 1060 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 TPCN1Q9ULQ1 816 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
NIFK-205ENST00000477693 B4DLN1 442 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 DNM1LO00429 736 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 CDKL5O76039 1030 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 CFBP00751 764 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 CDC27P30260 824 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 METAP2P50579 478 aaKnown RBP eCLIP11.28□□□□□ -0.6
NIFK-205ENST00000477693 MRPL12P52815 198 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 FUT2Q10981 343 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 ANO1Q5XXA6 986 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 PAWRQ96IZ0 340 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 MPHOSPH6Q99547 160 aaKnown RBP11.28□□□□□ -0.6
NIFK-205ENST00000477693 VTA1Q9NP79 307 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
NIFK-205ENST00000477693 MYH6P13533 1939 aa11.27□□□□□ -0.6
NIFK-205ENST00000477693 CEP290O15078 2479 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 ADCY6O43306 1168 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.61
NIFK-205ENST00000477693 COL6A1P12109 1028 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 PDCP20941 246 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 HMGN5P82970 282 aaKnown RBP11.27□□□□□ -0.61
NIFK-205ENST00000477693 ME3Q16798 604 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
NIFK-205ENST00000477693 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 NSUN6Q8TEA1 469 aaKnown RBP11.27□□□□□ -0.61
NIFK-205ENST00000477693 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
NIFK-205ENST00000477693 TRIOBPQ9H2D6 2365 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 hCG_1984214I3L0E3 225 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 DLL1O00548 723 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
NIFK-205ENST00000477693 NKX3-2P78367 333 aa11.26□□□□□ -0.61
NIFK-205ENST00000477693 PDE4DQ08499 809 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms