RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
TRAIP-206ENST00000477546 VPS13AQ96RL7 3174 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 ATRXP46100 2492 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 USP17L21D6R901 530 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 NBNO60934 754 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 MYL3P08590 195 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 ICAM3P32942 547 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 ZAP70P43403 619 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 IKBKEQ14164 716 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 TMEM63BQ5T3F8 832 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 FBXO11Q86XK2 927 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 RIPOR3Q96MK2 946 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 RAVER2Q9HCJ3 691 aaKnown RBP12.44□□□□□ -0.42
TRAIP-206ENST00000477546 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
TRAIP-206ENST00000477546 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 MYO5AQ9Y4I1 1855 aaKnown RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 RAD21O60216 631 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 ZBED4O75132 1171 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 RBL2Q08999 1139 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 DUSP28Q4G0W2 176 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 TMEM192Q8IY95 271 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 MSLNLQ96KJ4 702 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
TRAIP-206ENST00000477546 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
TRAIP-206ENST00000477546 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 OAZ1P54368 228 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 COL9A2Q14055 689 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-206ENST00000477546 PTGISQ16647 500 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 ST3GAL2Q16842 350 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 KIAA1211Q6ZU35 1233 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 EEPD1Q7L9B9 569 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 COL26A1Q96A83 441 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 NUP88Q99567 741 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-206ENST00000477546 LMAN2LQ9H0V9 348 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 SLC38A10Q9HBR0 1119 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 EP300Q09472 2414 aaPredicted RBP12.42□□□□□ -0.42
TRAIP-206ENST00000477546 DMXL1Q9Y485 3027 aa12.42□□□□□ -0.42
TRAIP-206ENST00000477546 MYO7AQ13402 2215 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 KPNA6O60684 536 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 AMHP03971 560 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
TRAIP-206ENST00000477546 NDUFV1P49821 464 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 BRDTQ58F21 947 aaPredicted RBP12.41□□□□□ -0.42
TRAIP-206ENST00000477546 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAIP-206ENST00000477546 MYOCDQ8IZQ8 938 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 DYNLL2Q96FJ2 89 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 CTAGE1Q96RT6 745 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
TRAIP-206ENST00000477546 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
TRAIP-206ENST00000477546 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 DLL3Q9NYJ7 618 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 DNAH14Q0VDD8 3507 aa12.41□□□□□ -0.42
TRAIP-206ENST00000477546 LINC01565O15544 149 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 CYP2D6P10635 497 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 CKBP12277 381 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAIP-206ENST00000477546 ADAM15Q13444 863 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 DHX38Q92620 1227 aaKnown RBP12.4□□□□□ -0.42
TRAIP-206ENST00000477546 YME1L1Q96TA2 773 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
TRAIP-206ENST00000477546 DCP1AQ9NPI6 582 aaPredicted RBP12.4□□□□□ -0.42
TRAIP-206ENST00000477546 DDX49Q9Y6V7 483 aaKnown RBP12.4□□□□□ -0.42
TRAIP-206ENST00000477546 CHD6Q8TD26 2715 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
TRAIP-206ENST00000477546 RAD50Q92878 1312 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 C5orf67F2Z3F1 127 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 COASYQ13057 564 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 SESTD1Q86VW0 696 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 MORC4Q8TE76 937 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 KIFC2Q96AC6 838 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
TRAIP-206ENST00000477546 WDR11Q9BZH6 1224 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 IGFLR1Q9H665 355 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 ZNF292O60281 2723 aa12.39□□□□□ -0.43
TRAIP-206ENST00000477546 DMDP11532 3685 aa12.38□□□□□ -0.43
TRAIP-206ENST00000477546 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
TRAIP-206ENST00000477546 LGR5O75473 907 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms