RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 CHD9Q3L8U1 2897 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 A6NJR5 290 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 ARIH2O95376 493 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 SUPT20HL2P0C7V6 817 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 CYP2C9P11712 490 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 RPUSD2Q8IZ73 545 aaKnown RBP13.29□□□□□ -0.28
HDLBP-236ENST00000477477 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 USP38Q8NB14 1042 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 COPS5Q92905 334 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 VWCEQ96DN2 955 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 SCLYQ96I15 445 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 ZSWIM5Q9P217 1185 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 MSRAQ9UJ68 235 aa13.29□□□□□ -0.28
HDLBP-236ENST00000477477 KPNA6O60684 536 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 PFKMP08237 780 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 TXNP10599 105 aaKnown RBP13.28□□□□□ -0.28
HDLBP-236ENST00000477477 TTLL4Q14679 1199 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 QRICH1Q2TAL8 776 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 NBPF20Q3BBV1 942 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 CCDC62Q6P9F0 684 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-236ENST00000477477 TBC1D5Q92609 795 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 GAS2L1Q99501 681 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-236ENST00000477477 KRT23Q9C075 422 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 IL25Q9H293 177 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 CNNM2Q9H8M5 875 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 COL20A1Q9P218 1284 aa13.28□□□□□ -0.28
HDLBP-236ENST00000477477 SPTBN5Q9NRC6 3674 aaKnown RBP13.27□□□□□ -0.28
HDLBP-236ENST00000477477 PARP1P09874 1014 aaKnown RBP13.27□□□□□ -0.29
HDLBP-236ENST00000477477 FAM47CQ5HY64 1035 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 FBXO11Q86XK2 927 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 MCF2L2Q86YR7 1114 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 NSUN6Q8TEA1 469 aaKnown RBP13.27□□□□□ -0.29
HDLBP-236ENST00000477477 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
HDLBP-236ENST00000477477 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
HDLBP-236ENST00000477477 DHX16O60231 1041 aaKnown RBP13.26□□□□□ -0.29
HDLBP-236ENST00000477477 PTPN11Q06124 597 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-236ENST00000477477 IFIT1BQ5T764 474 aaKnown RBP13.26□□□□□ -0.29
HDLBP-236ENST00000477477 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
HDLBP-236ENST00000477477 SCN10AQ9Y5Y9 1956 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
HDLBP-236ENST00000477477 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 GH1P01241 217 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 MMP3P08254 477 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 GSPT1P15170 499 aaKnown RBP13.25□□□□□ -0.29
HDLBP-236ENST00000477477 PDE4AP27815 886 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 RFC2P35250 354 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 RABGGTBP53611 331 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 ADGRE1Q14246 886 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 SEC23AQ15436 765 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 STXBP2Q15833 593 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 LY6KQ17RY6 165 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 SEPT14Q6ZU15 432 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 DEFB128Q7Z7B8 93 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 CHD7Q9P2D1 2997 aa13.25□□□□□ -0.29
HDLBP-236ENST00000477477 OPLAHO14841 1288 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 ATP2A2P16615 1042 aaKnown RBP13.24□□□□□ -0.29
HDLBP-236ENST00000477477 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
HDLBP-236ENST00000477477 GHRHRQ02643 423 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 NOD1Q9Y239 953 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 PCDHA11Q9Y5I1 949 aa13.24□□□□□ -0.29
HDLBP-236ENST00000477477 TTC28Q96AY4 2481 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-236ENST00000477477 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
HDLBP-236ENST00000477477 CFBP00751 764 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 IQCF3P0C7M6 154 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 ACTN1P12814 892 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 MYOGP15173 224 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 HSD17B4P51659 736 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 BFSP2Q13515 415 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 SESTD1Q86VW0 696 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 RETREG2Q8NC44 543 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
HDLBP-236ENST00000477477 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 PXMP2Q9NR77 195 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
HDLBP-236ENST00000477477 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-236ENST00000477477 ZBTB5O15062 677 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms