RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 RNF225M0QZC1 329 aaPredicted RBP12.89□□□□□ -0.35
NUP188-205ENST00000477069 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 FCER1AP12319 257 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 KCNA3P22001 575 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 CCNE1P24864 410 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 PPP1R2P41236 205 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 MMP14P50281 582 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 MTF1Q14872 753 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 ECM1Q16610 540 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
NUP188-205ENST00000477069 POTEAQ6S8J7 498 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 BTNL9Q6UXG8 535 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 SV2BQ7L1I2 683 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 P2RX5Q93086 422 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
NUP188-205ENST00000477069 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 ZNF215Q9UL58 517 aaPredicted RBP12.89□□□□□ -0.35
NUP188-205ENST00000477069 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
NUP188-205ENST00000477069 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.354e-6■■□□□ 11.7
NUP188-205ENST00000477069 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L15C9J2P7 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L13C9JLJ4 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L11C9JVI0 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L18D6R9N7 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L22D6RA61 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L17D6RBQ6 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L19D6RCP7 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L20D6RJB6 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L24Q0WX57 530 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 TRIM14Q14142 442 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 MCM6Q14566 821 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP17L6PQ6QN14 398 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 PVALEFA0A1B0GWK0 134 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 GH2P01242 217 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 USP11P51784 963 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 NAA30Q147X3 362 aaPredicted RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 ANKRD40Q6AI12 368 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 MOXD1Q6UVY6 613 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 CSRNP1Q96S65 589 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 ANO3Q9BYT9 981 aa12.88□□□□□ -0.35
NUP188-205ENST00000477069 BRCA1P38398 1863 aaKnown RBP12.88□□□□□ -0.35
NUP188-205ENST00000477069 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 A0A1W2PQC6 194 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 AP3B2Q13367 1082 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
NUP188-205ENST00000477069 ERO1AQ96HE7 468 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 TRIM47Q96LD4 638 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 ABHD10Q9NUJ1 306 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
NUP188-205ENST00000477069 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
NUP188-205ENST00000477069 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
NUP188-205ENST00000477069 KRT79Q5XKE5 535 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 GJA10Q969M2 543 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
NUP188-205ENST00000477069 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 ADGRG1Q9Y653 693 aa12.87□□□□□ -0.35
NUP188-205ENST00000477069 OPLAHO14841 1288 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 SYDE2Q5VT97 1194 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 PSMD14O00487 310 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 SLC26A4O43511 780 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 ERVK-24P63145 666 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 UBXN1Q04323 297 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 FER1L6Q2WGJ9 1857 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 SMCHD1A6NHR9 2005 aa12.86□□□□□ -0.35
NUP188-205ENST00000477069 BMP3P12645 472 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 HOXA7P31268 230 aaPredicted RBP12.85□□□□□ -0.35
NUP188-205ENST00000477069 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 ZNF70Q9UC06 446 aaPredicted RBP12.85□□□□□ -0.35
NUP188-205ENST00000477069 RAD21O60216 631 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 CCDC175P0C221 793 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 SNAP25P60880 206 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms