RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 DNAH12Q6ZR08 3092 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 NID2Q14112 1375 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 RBAK-RBAKDNI3L0D1 243 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 ARIH2O95376 493 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 COL6A1P12109 1028 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 SMPD1P17405 629 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 EIF2AK2P19525 551 aaKnown RBP14.39□□□□□ -0.11
APTX-220ENST00000476858 AK2P54819 239 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 GHRHRQ02643 423 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 LRRC41Q15345 812 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 PKN1Q16512 942 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 UBE2SQ16763 222 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 SYNE3Q6ZMZ3 975 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 MSL3Q8N5Y2 521 aaKnown RBP14.39□□□□□ -0.11
APTX-220ENST00000476858 COPS5Q92905 334 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 LZTS2Q9BRK4 669 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 SYNRGQ9UMZ2 1314 aa14.39□□□□□ -0.11
APTX-220ENST00000476858 ASB14A6NK59 587 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 MEIS2O14770 477 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 ADAMTS4O75173 837 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 GNAQP50148 359 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 HEATR3Q7Z4Q2 680 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 ABHD16BQ9H3Z7 469 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 XPNPEP3Q9NQH7 507 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 NRBP1Q9UHY1 535 aa14.38□□□□□ -0.11
APTX-220ENST00000476858 STXBP3O00186 592 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 RGS20O76081 388 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 AKR1A1P14550 325 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 ANAPC15P60006 121 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 BEX3Q00994 111 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 ST3GAL1Q11201 340 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 PGBD1Q96JS3 809 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 BCAS3Q9H6U6 928 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 PXMP2Q9NR77 195 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
APTX-220ENST00000476858 FAM184BQ9ULE4 1060 aa14.37□□□□□ -0.11
APTX-220ENST00000476858 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
APTX-220ENST00000476858 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
APTX-220ENST00000476858 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
APTX-220ENST00000476858 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 PDE4DQ08499 809 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 LRRC26Q2I0M4 334 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
APTX-220ENST00000476858 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 C11orf49Q9H6J7 331 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 TMEM260Q9NX78 707 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 ADD3Q9UEY8 706 aaKnown RBP14.36□□□□□ -0.11
APTX-220ENST00000476858 SEC63Q9UGP8 760 aaKnown RBP14.36□□□□□ -0.11
APTX-220ENST00000476858 PNMA2Q9UL42 364 aa14.36□□□□□ -0.11
APTX-220ENST00000476858 SORBS3O60504 671 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 RARBP10826 455 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 MYCLP12524 364 aaPredicted RBP14.35□□□□□ -0.11
APTX-220ENST00000476858 RCAN1P53805 252 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
APTX-220ENST00000476858 TNFAIP2Q03169 654 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 SCRN1Q12765 414 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 PGM5Q15124 567 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 ARHGEF16Q5VV41 709 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 NECAB2Q7Z6G3 386 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 KLHDC9Q8NEP7 349 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 PDCD2LQ9BRP1 358 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
APTX-220ENST00000476858 VTA1Q9NP79 307 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
APTX-220ENST00000476858 RBM47A0AV96 593 aaKnown RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 DNM1LO00429 736 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 MSCO60682 206 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 NR3C2P08235 984 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 NEK4P51957 841 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 MRPS9P82933 396 aaKnown RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 ME3Q16798 604 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 WDR11Q9BZH6 1224 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 ALDH8A1Q9H2A2 487 aaPredicted RBP14.34□□□□□ -0.11
APTX-220ENST00000476858 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
APTX-220ENST00000476858 DYNC1LI2O43237 492 aaPredicted RBP14.33□□□□□ -0.12
APTX-220ENST00000476858 PRPF3O43395 683 aaKnown RBP14.33□□□□□ -0.12
APTX-220ENST00000476858 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.12
APTX-220ENST00000476858 NAPAP54920 295 aa14.33□□□□□ -0.12
APTX-220ENST00000476858 GJA9P57773 515 aa14.33□□□□□ -0.12
APTX-220ENST00000476858 SP2Q02086 613 aa14.33□□□□□ -0.12
APTX-220ENST00000476858 KCNA10Q16322 511 aa14.33□□□□□ -0.12
APTX-220ENST00000476858 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
APTX-220ENST00000476858 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
APTX-220ENST00000476858 CCDC62Q6P9F0 684 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms