RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 HRKO00198 91 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 SRGAP3O43295 1099 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 CPP00450 1065 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 NTRK1P04629 796 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 CFPP27918 469 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 BCL6P41182 706 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 MAPKAPK2P49137 400 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 HSP90AA2PQ14568 343 aaPredicted RBP5.52□□□□□ -1.53
ITGA4-208ENST00000476824 SSPNQ14714 243 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 NLRP10Q86W26 655 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 LDHDQ86WU2 507 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 BHLHE22Q8NFJ8 381 aaPredicted RBP5.52□□□□□ -1.53
ITGA4-208ENST00000476824 PANK1Q8TE04 598 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 OSBP2Q969R2 916 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 SGSM3Q96HU1 749 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 AARSD1Q9BTE6 412 aaKnown RBP5.52□□□□□ -1.53
ITGA4-208ENST00000476824 SIRPGQ9P1W8 387 aa5.52□□□□□ -1.53
ITGA4-208ENST00000476824 DBX1A6NMT0 343 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 C22orf46C9J442 243 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 ABLIM1O14639 778 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 ADCY3O60266 1144 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 MSCO60682 206 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 LINC00310P59036 64 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 JAG1P78504 1218 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 RASGRF1Q13972 1273 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 RASA3Q14644 834 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 NR1I3Q14994 352 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 SF3A1Q15459 793 aaKnown RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 NTRK3Q16288 839 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 KCNA10Q16322 511 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 MTERF2Q49AM1 385 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 NBPF6Q5VWK0 638 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 FOXB2Q5VYV0 432 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 E4F1Q66K89 784 aaPredicted RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 WWC2Q6AWC2 1192 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 ZC3H14Q6PJT7 736 aaKnown RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 USP53Q70EK8 1073 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 KRTAP1-3Q8IUG1 177 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 IGDCC3Q8IVU1 814 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 SREK1Q8WXA9 508 aaKnown RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 KCTD13Q8WZ19 329 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 ARMC5Q96C12 935 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 NBPF4Q96M43 638 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 SPATA9Q9BWV2 254 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 CCDC113Q9H0I3 377 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 SNTG2Q9NY99 539 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 DBR1Q9UK59 544 aaKnown RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 PCDHA2Q9Y5H9 948 aa5.51□□□□□ -1.53
ITGA4-208ENST00000476824 TIMM13Q9Y5L4 95 aaPredicted RBP5.51□□□□□ -1.53
ITGA4-208ENST00000476824 IQCA1LA6NCM1 817 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 PABPC1P11940 636 aaKnown RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 LTBRP36941 435 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 SSRP1Q08945 709 aaKnown RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 MAP4K2Q12851 820 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 KCNAB2Q13303 367 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 ACBD5Q5T8D3 534 aaPredicted RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 KCNT2Q6UVM3 1135 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 CEP68Q76N32 757 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 CABP7Q86V35 215 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 C1QL4Q86Z23 238 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 DEPDC7Q96QD5 511 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 EPB41L4AQ9HCS5 686 aaPredicted RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
ITGA4-208ENST00000476824 PCDHA5Q9Y5H7 936 aa5.5□□□□□ -1.53
ITGA4-208ENST00000476824 TRAV20A0A0B4J274 112 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 N4BP3O15049 544 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 FAM153BP0C7A2 387 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 FGFR1P11362 822 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 PI3P19957 117 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 FBLN1P23142 703 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 MC3RP41968 323 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 TMEM62Q0P6H9 643 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 TESK1Q15569 626 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 OLFML2BQ68BL8 750 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 IQCEQ6IPM2 695 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 NSMFQ6X4W1 530 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 TMEFF1Q8IYR6 380 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 LRRC47Q8N1G4 583 aaKnown RBP5.49□□□□□ -1.53
ITGA4-208ENST00000476824 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 CNOT6Q9ULM6 557 aaKnown RBP5.49□□□□□ -1.53
ITGA4-208ENST00000476824 KCTD3Q9Y597 815 aa5.49□□□□□ -1.53
ITGA4-208ENST00000476824 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
ITGA4-208ENST00000476824 ATF2P15336 505 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 LIMS1P48059 325 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 FAM209AQ5JX71 171 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 NETO2Q8NC67 525 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
ITGA4-208ENST00000476824 SIGLEC10Q96LC7 697 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 SRPK1Q96SB4 655 aaKnown RBP5.48□□□□□ -1.53
ITGA4-208ENST00000476824 DNAJC7Q99615 494 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 PHF20Q9BVI0 1012 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 IRF2BPLQ9H1B7 796 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 NPFFR2Q9Y5X5 522 aa5.48□□□□□ -1.53
ITGA4-208ENST00000476824 IRAK3Q9Y616 596 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms