RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 SMPD1P17405 629 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 EDNRBP24530 442 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 TAPT1Q6NXT6 567 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
CCM2-208ENST00000476594 PIGSQ96S52 555 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 RBM28Q9NW13 759 aaKnown RBP11.82□□□□□ -0.52
CCM2-208ENST00000476594 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 ASTN1O14525 1302 aa11.82□□□□□ -0.52
CCM2-208ENST00000476594 LRRC37A2A6NM11 1700 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.81□□□□□ -0.52
CCM2-208ENST00000476594 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
CCM2-208ENST00000476594 KPNA6O60684 536 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 RAG1P15918 1043 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 PSMA5P28066 241 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 HSD17B4P51659 736 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 GHRHRQ02643 423 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 TLE2Q04725 743 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 CCSAPQ6IQ19 270 aaPredicted RBP11.81□□□□□ -0.52
CCM2-208ENST00000476594 KCNV1Q6PIU1 500 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 DHX32Q7L7V1 743 aaKnown RBP11.81□□□□□ -0.52
CCM2-208ENST00000476594 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 SGMS1Q86VZ5 419 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 PURBQ96QR8 312 aaKnown RBP11.81□□□□□ -0.52
CCM2-208ENST00000476594 PRO3102Q9H379 93 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
CCM2-208ENST00000476594 ARVCFO00192 962 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 ADCY6O43306 1168 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
CCM2-208ENST00000476594 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
CCM2-208ENST00000476594 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCM2-208ENST00000476594 RCAN1P53805 252 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
CCM2-208ENST00000476594 GNPTABQ3T906 1256 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 SKAP1Q86WV1 359 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 MICU3Q86XE3 530 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 PDGFCQ9NRA1 345 aa11.8□□□□□ -0.52
CCM2-208ENST00000476594 CCDC196A0A1B0GTZ2 297 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 MYADML2A6NDP7 307 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 STAM2O75886 525 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 GH1P01241 217 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 NR3C2P08235 984 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 EIF2AK2P19525 551 aaKnown RBP11.79□□□□□ -0.52
CCM2-208ENST00000476594 CCND2P30279 289 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 BEX3Q00994 111 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 BLOC1S2Q6QNY1 142 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 TEX2Q8IWB9 1127 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 FANCBQ8NB91 859 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 MYL10Q9BUA6 226 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 EHMT1Q9H9B1 1298 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
CCM2-208ENST00000476594 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 LCTP09848 1927 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 ZBTB43O43298 467 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 CYTH3O43739 400 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 MYL3P08590 195 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 RTN1Q16799 776 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 LRIT3Q3SXY7 679 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 APOA5Q6Q788 366 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 SEPT14Q6ZU15 432 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
CCM2-208ENST00000476594 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
CCM2-208ENST00000476594 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
CCM2-208ENST00000476594 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
CCM2-208ENST00000476594 GOLGA8AA7E2F4 631 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 GOLGA8BA8MQT2 603 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 CTAGE5O15320 804 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
CCM2-208ENST00000476594 TGFB3P10600 412 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 MYCLP12524 364 aaPredicted RBP11.77□□□□□ -0.53
CCM2-208ENST00000476594 CASTP20810 708 aaKnown RBP11.77□□□□□ -0.53
CCM2-208ENST00000476594 HSPA4P34932 840 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 CDK7P50613 346 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 FPGSQ05932 587 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 XRRA1Q6P2D8 792 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 TMTC3Q6ZXV5 915 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 FCHSD1Q86WN1 690 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 TMEM199Q8N511 208 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 TBC1D5Q92609 795 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.53
CCM2-208ENST00000476594 KATNAL1Q9BW62 490 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 GLT8D2Q9H1C3 349 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 COL20A1Q9P218 1284 aa11.77□□□□□ -0.53
CCM2-208ENST00000476594 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms