RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KIAA0100Q14667 2235 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 SCO2A0A1W2PP80 73 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 DEKP35659 375 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 CASP7P55210 303 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 FKBP1AP62942 108 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 PCDH1Q08174 1060 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 KCNA1Q09470 495 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 NFIAQ12857 509 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 IFIT5Q13325 482 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF423Q2M1K9 1284 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 TBC1D10BQ4KMP7 808 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 RPS26P11Q5JNZ5 115 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 C20orf194Q5TEA3 1177 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 CST9Q5W186 159 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 RNF43Q68DV7 783 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 CYP4F22Q6NT55 531 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 RGMBQ6NW40 437 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 C15orf52Q6ZUT6 534 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF804AQ7Z570 1209 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 CLEC10AQ8IUN9 316 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 TSPYL6Q8N831 410 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 GLIS3Q8NEA6 775 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 SLC7A3Q8WY07 619 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 GMLQ99445 158 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 FAM83CQ9BQN1 747 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 DBNDD2Q9BQY9 259 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 TRIM56Q9BRZ2 755 aaKnown RBP5.24□□□□□ -1.57
VPS13D-206ENST00000476045 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 MYOZ2Q9NPC6 264 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 MINPP1Q9UNW1 487 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF521Q96K83 1311 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 KIF16BQ96L93 1317 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 TNRC18O15417 2968 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 UNCXA6NJT0 531 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 GRM8O00222 908 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 EIF1AYO14602 144 aaKnown RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 CSF1RP07333 972 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 LBX1P52954 281 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 TNFAIP1Q13829 316 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 DSC3Q14574 896 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 CWF19L2Q2TBE0 894 aaKnown RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 TAF7LQ5H9L4 462 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 DACT2Q5SW24 774 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 ASAP3Q8TDY4 903 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 CDCA5Q96FF9 252 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 CSRNP1Q96S65 589 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 GSX1Q9H4S2 264 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 NPHS2Q9NP85 383 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 RPAP1Q9BWH6 1393 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-206ENST00000476045 MAST3O60307 1309 aa5.23□□□□□ -1.57
VPS13D-206ENST00000476045 ADM5C9JUS6 153 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 E9PSI1 815 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 MYO1BO43795 1136 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 VAMP4O75379 141 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 SPINK2P20155 84 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF157P51786 506 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-206ENST00000476045 EXOSC9Q06265 439 aaKnown RBP5.22□□□□□ -1.57
VPS13D-206ENST00000476045 CHRNDQ07001 517 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 SREBF2Q12772 1141 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 GRM1Q13255 1194 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 SPRED3Q2MJR0 410 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 CCDC57Q2TAC2 916 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 BEND3Q5T5X7 828 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 ANGEL2Q5VTE6 544 aaKnown RBP5.22□□□□□ -1.57
VPS13D-206ENST00000476045 FDX2Q6P4F2 183 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 TMC7Q7Z402 723 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 USP48Q86UV5 1035 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 TRIM42Q8IWZ5 723 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 C2CD4AQ8NCU7 369 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-206ENST00000476045 EZH1Q92800 747 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-206ENST00000476045 CCDC74AQ96AQ1 378 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 ABHD8Q96I13 439 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 SRCIN1Q9C0H9 1055 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 DCTN4Q9UJW0 460 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 HDAC5Q9UQL6 1122 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 UTYO14607 1347 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 MROH5Q6ZUA9 1318 aa5.22□□□□□ -1.57
VPS13D-206ENST00000476045 CENPFP49454 3210 aa5.21□□□□□ -1.57
VPS13D-206ENST00000476045 AK9Q5TCS8 1911 aa5.21□□□□□ -1.57
VPS13D-206ENST00000476045 MYH2Q9UKX2 1941 aa5.21□□□□□ -1.57
VPS13D-206ENST00000476045 SHTN1A0MZ66 631 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 PRR19A6NJB7 356 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 FAM155AB1AL88 458 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-206ENST00000476045 TREHO43280 583 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 AOC2O75106 756 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 CTSBP07858 339 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 IL1R1P14778 569 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 UBE4AQ14139 1066 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 CPSF6Q16630 551 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS13D-206ENST00000476045 EXOSC6Q5RKV6 272 aaKnown RBP5.21□□□□□ -1.58
VPS13D-206ENST00000476045 HP1BP3Q5SSJ5 553 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-206ENST00000476045 G2E3Q7L622 706 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 ARMC9Q7Z3E5 817 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
VPS13D-206ENST00000476045 TBC1D22AQ8WUA7 517 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms