RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NR5A1Q13285 461 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 TRIM14Q14142 442 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 WTAPQ15007 396 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 MEA1Q16626 185 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 LONRF2Q1L5Z9 754 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 DACT2Q5SW24 774 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 ARL6IP4Q66PJ3 421 aaKnown RBP7.74□□□□□ -1.17
UBR4-212ENST00000475973 HOMER1Q86YM7 354 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 IRF2BP1Q8IU81 584 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 TMTC1Q8IUR5 882 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 CNGA4Q8IV77 575 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 TRIM22Q8IYM9 498 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 CEP112Q8N8E3 955 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 ZNF384Q8TF68 577 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 GOLGA1Q92805 767 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 GMLQ99445 158 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 SLC4A5Q9BY07 1137 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 TTYH3Q9C0H2 523 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 NAPBQ9H115 298 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 CNNM1Q9NRU3 951 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 RBM28Q9NW13 759 aaKnown RBP7.74□□□□□ -1.17
UBR4-212ENST00000475973 RWDD2AQ9UIY3 292 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 KCNJ14Q9UNX9 436 aa7.74□□□□□ -1.17
UBR4-212ENST00000475973 COL1A1P02452 1464 aaPredicted RBP7.74□□□□□ -1.17
UBR4-212ENST00000475973 RNF225M0QZC1 329 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 WNT7AO00755 349 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 ARHGAP33O14559 1287 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 PRKAB2O43741 272 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 IDH1O75874 414 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 MYL1P05976 194 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 CALM1P0DP23 149 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 CALM2P0DP24 149 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 CALM3P0DP25 149 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 GCGRP47871 477 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 AARSP49588 968 aaKnown RBP eCLIP7.73□□□□□ -1.17
UBR4-212ENST00000475973 PSEN2P49810 448 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 FXR1P51114 621 aaKnown RBP eCLIP7.73□□□□□ -1.176e-7■■■□□ 15.6
UBR4-212ENST00000475973 ZNF157P51786 506 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 ADKP55263 362 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 HNRNPH2P55795 449 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 ERVK-24P63145 666 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 GTF2IP78347 998 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 SPAG1Q07617 926 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 PPARAQ07869 468 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 RBL2Q08999 1139 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 GOLGA8FQ08AF8 430 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 GOLGA8DPQ0D2H9 430 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 SMC1AQ14683 1233 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 KCNB1Q14721 858 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 MTF1Q14872 753 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 SART3Q15020 963 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 QPCTQ16769 361 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 WHAMMP3Q1A5X7 153 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 SBK1Q52WX2 424 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 PAPD7Q5XG87 772 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 ISM2Q6H9L7 571 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 FOXR2Q6PJQ5 311 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 C15orf52Q6ZUT6 534 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 TMTC3Q6ZXV5 915 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 ZNF771Q7L3S4 317 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 ZNF572Q7Z3I7 529 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 ENAHQ8N8S7 591 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 RDH13Q8NBN7 331 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 PURBQ96QR8 312 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 DNAJC7Q99615 494 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 NACAP1Q9BZK3 213 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 ARMT1Q9H993 441 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 VIPAS39Q9H9C1 493 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 CD209Q9NNX6 404 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 ARFGAP3Q9NP61 516 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 TMEM51Q9NW97 253 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 RABGEF1Q9UJ41 708 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 NAP1L2Q9ULW6 460 aaPredicted RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 REXO2Q9Y3B8 237 aaKnown RBP7.73□□□□□ -1.17
UBR4-212ENST00000475973 CNTNAP5Q8WYK1 1306 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 IRS2Q9Y4H2 1338 aa7.73□□□□□ -1.17
UBR4-212ENST00000475973 H3BQF6 201 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 WNT10BO00744 389 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 KLRC4O43908 158 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 SEC31AO94979 1220 aaKnown RBP7.72□□□□□ -1.17
UBR4-212ENST00000475973 SLC10A3P09131 477 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 CAPN2P17655 700 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 KLRK1P26718 216 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 HNRNPH3P31942 346 aaKnown RBP7.72□□□□□ -1.17
UBR4-212ENST00000475973 USP46P62068 366 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 CDK17Q00537 523 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 ITIH3Q06033 890 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 UBE4AQ14139 1066 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 IL17AQ16552 155 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 NAALADL2Q58DX5 795 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 FIGNQ5HY92 759 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 PRPF38BQ5VTL8 546 aaKnown RBP7.72□□□□□ -1.17
UBR4-212ENST00000475973 TRAPPC11Q7Z392 1133 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 ADGRA1Q86SQ6 560 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 KIAA0825Q8IV33 1275 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 ADSSL1Q8N142 457 aa7.72□□□□□ -1.17
UBR4-212ENST00000475973 TXLNBQ8N3L3 684 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms