RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 NBPF20Q3BBV1 942 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 USH1GQ495M9 461 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 DEFB128Q7Z7B8 93 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 TBC1D10CQ8IV04 446 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 RETREG2Q8NC44 543 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 RILPL2Q969X0 211 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
CDRT1-205ENST00000475944 SPTBN5Q9NRC6 3674 aaKnown RBP12.69□□□□□ -0.38
CDRT1-205ENST00000475944 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 ZNF213O14771 459 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 COPS5Q92905 334 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 SLC9A7Q96T83 725 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
CDRT1-205ENST00000475944 ABCB11O95342 1321 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 NEDD4P46934 1319 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 IQCF3P0C7M6 154 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 GOLGA8HP0CJ92 632 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 MYOGP15173 224 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 SDSP20132 328 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 BFSP2Q13515 415 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 AAMPQ13685 434 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-205ENST00000475944 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 PHOSPHO2Q8TCD6 241 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
CDRT1-205ENST00000475944 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-205ENST00000475944 ARIH2O95376 493 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 CA3P07451 260 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 ASPRV1Q53RT3 343 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 MICALL1Q8N3F8 863 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 ADAMTS19Q8TE59 1207 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
CDRT1-205ENST00000475944 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-205ENST00000475944 FTOQ9C0B1 505 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDRT1-205ENST00000475944 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
CDRT1-205ENST00000475944 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 CHD9Q3L8U1 2897 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 KIF28PB7ZC32 967 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 KDM4AO75164 1064 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 BAIAP3O94812 1187 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 GH1P01241 217 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 MMP3P08254 477 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 CHMP4BP1P59074 171 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 STXBP2Q15833 593 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 PTGISQ16647 500 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 SMC5Q8IY18 1101 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 ADGRF4Q8IZF3 695 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-205ENST00000475944 PPP1R13LQ8WUF5 828 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 AFG1LQ8WV93 481 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-205ENST00000475944 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
CDRT1-205ENST00000475944 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
CDRT1-205ENST00000475944 B4E1Z4 1266 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 HIP1O00291 1037 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 DHX16O60231 1041 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 PARNO95453 639 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 POU3F3P20264 500 aaPredicted RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 CASTP20810 708 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 KCNJ6P48051 423 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 SKIV2LQ15477 1246 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 LY6KQ17RY6 165 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 FBXO11Q86XK2 927 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 HERC6Q8IVU3 1022 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 AFAP1L1Q8TED9 768 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 ANKS1AQ92625 1134 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 RMDN3Q96TC7 470 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
CDRT1-205ENST00000475944 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
CDRT1-205ENST00000475944 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
CDRT1-205ENST00000475944 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 DGKDQ16760 1214 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 GDF6Q6KF10 455 aaPredicted RBP12.64□□□□□ -0.39
CDRT1-205ENST00000475944 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms