RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TRIB2Q92519 343 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 RMDN3Q96TC7 470 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 TSHZ2Q9NRE2 1034 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 TMEM260Q9NX78 707 aa25.42■■□□□ 1.66
MCF2L2-209ENST00000475664 RPTORQ8N122 1335 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 LOC102724159A0A0B4J2E5 919 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 M0R2N6 131 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 MMP1P03956 469 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 ELNP15502 786 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 AP3B2Q13367 1082 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 PWP2Q15269 919 aaKnown RBP25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 FBXO46Q6PJ61 603 aaPredicted RBP25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 MSL3Q8N5Y2 521 aaKnown RBP25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 SLAIN1Q8ND83 568 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 FBXO18Q8NFZ0 1043 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 NSUN6Q8TEA1 469 aaKnown RBP25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 PXMP2Q9NR77 195 aa25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 BIN2Q9UBW5 565 aaPredicted RBP25.41■■□□□ 1.66
MCF2L2-209ENST00000475664 EDNRBP24530 442 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 GUCY1B3Q02153 619 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 RASGRP4Q8TDF6 673 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 MORC4Q8TE76 937 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 TINF2Q9BSI4 451 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 PCDHA6Q9UN73 950 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 PCDHA8Q9Y5H6 950 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 HTTP42858 3142 aa25.4■■□□□ 1.66
MCF2L2-209ENST00000475664 SYNGAP1Q96PV0 1343 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 SPDYE3A6NKU9 549 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 FOSP01100 380 aaPredicted RBP25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 HSP90AA1P07900 732 aaKnown RBP25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 ARHGEF16Q5VV41 709 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 JAKMIP3Q5VZ66 844 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 MCTP2Q6DN12 878 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 ANO3Q9BYT9 981 aa25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 DDX49Q9Y6V7 483 aaKnown RBP25.39■■□□□ 1.66
MCF2L2-209ENST00000475664 MYH7BA7E2Y1 1941 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 ASB14A6NK59 587 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 HMGCRP04035 888 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 EIF2AK2P19525 551 aaKnown RBP25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 GRK4P32298 578 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 KRT2P35908 639 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 ARMCX2Q7L311 632 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 OXER1Q8TDS5 423 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 PGBD1Q96JS3 809 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 IWS1Q96ST2 819 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 PDCD2LQ9BRP1 358 aa25.38■■□□□ 1.65
MCF2L2-209ENST00000475664 CYP2C19P33261 490 aa25.37■■□□□ 1.65
MCF2L2-209ENST00000475664 ANP32AP39687 249 aaKnown RBP25.37■■□□□ 1.65
MCF2L2-209ENST00000475664 DIS3L2Q8IYB7 885 aaKnown RBP25.37■■□□□ 1.65
MCF2L2-209ENST00000475664 IL31RAQ8NI17 732 aa25.37■■□□□ 1.65
MCF2L2-209ENST00000475664 BRMS1Q9HCU9 246 aa25.37■■□□□ 1.65
MCF2L2-209ENST00000475664 SNAI1O95863 264 aaPredicted RBP25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 PGM5Q15124 567 aa25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 MFSD14CQ5VZR4 134 aa25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 LARP1BQ659C4 914 aaKnown RBP25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 TNFRSF25Q93038 417 aa25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 MPHOSPH6Q99547 160 aaKnown RBP25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 EHMT1Q9H9B1 1298 aa25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.36■■□□□ 1.65
MCF2L2-209ENST00000475664 KIAA1217Q5T5P2 1943 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 B4DLN1 442 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 NR3C2P08235 984 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 PDCP20941 246 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 SREBF1P36956 1147 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 UBXN2AP68543 259 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 TRIM32Q13049 653 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 NR5A1Q13285 461 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 SAFBQ15424 915 aaKnown RBP eCLIP25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 SPRYD3Q8NCJ5 442 aa25.35■■□□□ 1.65
MCF2L2-209ENST00000475664 BTBD18B2RXH4 712 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 INHAP05111 366 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 PDE4DQ08499 809 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 SLC9C1Q4G0N8 1177 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 MAP3K21Q5TCX8 1036 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 KRT25Q7Z3Z0 450 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 VSIG10LQ86VR7 867 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 SH3TC2Q8TF17 1288 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 CRYGNQ8WXF5 182 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 MCOLN1Q9GZU1 580 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 KATNBL1Q9H079 304 aa25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 RBM19Q9Y4C8 960 aaKnown RBP25.34■■□□□ 1.65
MCF2L2-209ENST00000475664 CCND2P30279 289 aa25.33■■□□□ 1.65
MCF2L2-209ENST00000475664 PCNX4Q63HM2 1172 aa25.33■■□□□ 1.65
MCF2L2-209ENST00000475664 NRBP1Q9UHY1 535 aa25.33■■□□□ 1.65
MCF2L2-209ENST00000475664 H3BQV1 296 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 MYCLP12524 364 aaPredicted RBP25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 CYBAP13498 195 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 SYT1P21579 422 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 MRPS9P82933 396 aaKnown RBP25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 CACNB2Q08289 660 aaPredicted RBP25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 STXBP2Q15833 593 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 IFFO2Q5TF58 517 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 XRRA1Q6P2D8 792 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 FOXP1Q9H334 677 aaPredicted RBP25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 ABHD16BQ9H3Z7 469 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 CNPY2Q9Y2B0 182 aa25.32■■□□□ 1.64
MCF2L2-209ENST00000475664 CCDC194A0A1B0GVG4 234 aa25.31■■□□□ 1.64
MCF2L2-209ENST00000475664 PRKAR2AP13861 404 aaKnown RBP25.31■■□□□ 1.64
MCF2L2-209ENST00000475664 ARHGAP4P98171 946 aa25.31■■□□□ 1.64
MCF2L2-209ENST00000475664 NONOQ15233 471 aaKnown RBP eCLIP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms