RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CFAP221Q4G0U5 840 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 FKBP15Q5T1M5 1219 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 WLSQ5T9L3 541 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 RNF187Q5TA31 235 aaPredicted RBP19.66■□□□□ 0.74
CCM2-207ENST00000475551 PPP4R3AQ6IN85 833 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 CCDC13Q8IYE1 715 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 P2RX5Q93086 422 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 KBTBD4Q9NVX7 518 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 EHD2Q9NZN4 543 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 ARAP2Q8WZ64 1704 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 GLI1P08151 1106 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 MTIF2P46199 727 aaKnown RBP19.66■□□□□ 0.74
CCM2-207ENST00000475551 NLRP5P59047 1200 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 TYW1BQ6NUM6 668 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 TLR10Q9BXR5 811 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 NFU1Q9UMS0 254 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 MROH5Q6ZUA9 1318 aa19.66■□□□□ 0.74
CCM2-207ENST00000475551 DDAH1O94760 285 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 FAM153BP0C7A2 387 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 FAM153CQ494X1 144 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 ACTR5Q9H9F9 607 aaPredicted RBP19.65■□□□□ 0.74
CCM2-207ENST00000475551 FAM153AQ9UHL3 310 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 SLC5A1P13866 664 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 HDLBPQ00341 1268 aaKnown RBP19.65■□□□□ 0.74
CCM2-207ENST00000475551 ITGB3BPQ13352 177 aaPredicted RBP19.65■□□□□ 0.74
CCM2-207ENST00000475551 C3orf20Q8ND61 904 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 PSMB7Q99436 277 aa19.65■□□□□ 0.74
CCM2-207ENST00000475551 TMCO5BA8MYB1 307 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 MINDY4BA8MYZ0 360 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 EIF4A3P38919 411 aaKnown RBP19.64■□□□□ 0.74
CCM2-207ENST00000475551 PPP1R2P41236 205 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 C2CD5Q86YS7 1000 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 WHAMMQ8TF30 809 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 EPB41L5Q9HCM4 733 aa19.64■□□□□ 0.74
CCM2-207ENST00000475551 HEXIM1O94992 359 aaKnown RBP19.64■□□□□ 0.73
CCM2-207ENST00000475551 SCG2P13521 617 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 SEC24CP53992 1094 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 IFT88Q13099 833 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 ANKRD40Q6AI12 368 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 GIGYF2Q6Y7W6 1299 aaKnown RBP19.64■□□□□ 0.73
CCM2-207ENST00000475551 NLRP10Q86W26 655 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 RNF10Q8N5U6 811 aaKnown RBP19.64■□□□□ 0.73
CCM2-207ENST00000475551 ACSBG1Q96GR2 724 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 SLC40A1Q9NP59 571 aa19.64■□□□□ 0.73
CCM2-207ENST00000475551 NCK2O43639 380 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 ELF1P32519 619 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 SRBD1Q8N5C6 995 aaKnown RBP19.63■□□□□ 0.73
CCM2-207ENST00000475551 BANK1Q8NDB2 785 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 CCSER1Q9C0I3 900 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 ZNF330Q9Y3S2 320 aaPredicted RBP19.63■□□□□ 0.73
CCM2-207ENST00000475551 AKR1B10O60218 316 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 MAGEA1P43355 309 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 ARFGAP2Q8N6H7 521 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 MIGA1Q8NAN2 632 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 NOX5Q96PH1 765 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 SALL4Q9UJQ4 1053 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 BRWD3Q6RI45 1802 aa19.63■□□□□ 0.73
CCM2-207ENST00000475551 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
CCM2-207ENST00000475551 GUCY2DQ02846 1103 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 CEP85LQ5SZL2 805 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 DTHD1Q6ZMT9 781 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 IQCA1Q86XH1 822 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 SIK3Q9Y2K2 1263 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 GOLGA6L7A0A1B0GV03 622 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 CDR1P51861 262 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 PFKFB3Q16875 520 aaPredicted RBP19.62■□□□□ 0.73
CCM2-207ENST00000475551 CCDC50Q8IVM0 306 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 HELBQ8NG08 1087 aaPredicted RBP19.62■□□□□ 0.73
CCM2-207ENST00000475551 RASSF8Q8NHQ8 419 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 MAGEC3Q8TD91 643 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 IFT81Q8WYA0 676 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.62■□□□□ 0.735e-8■■■■■ 65.3
CCM2-207ENST00000475551 CCDC47Q96A33 483 aaKnown RBP19.62■□□□□ 0.73
CCM2-207ENST00000475551 CUEDC2Q9H467 287 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 MAGEF1Q9HAY2 307 aa19.62■□□□□ 0.73
CCM2-207ENST00000475551 GRID2IPA4D2P6 1211 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 E7EVH7 732 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 CCDC121Q6ZUS5 278 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 CYFIP2Q96F07 1278 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 MS4A14Q96JA4 679 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 TMBIM4Q9HC24 238 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 POLD4Q9HCU8 107 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 LRP5O75197 1615 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 PDE8AO60658 829 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 CALML3P27482 149 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 NF2P35240 595 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 HSPA9P38646 679 aaKnown RBP19.61■□□□□ 0.73
CCM2-207ENST00000475551 UBA7P41226 1012 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 LRIG3Q6UXM1 1119 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 CASKIN2Q8WXE0 1202 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 MTMR8Q96EF0 704 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 TMOD3Q9NYL9 352 aa19.61■□□□□ 0.73
CCM2-207ENST00000475551 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
CCM2-207ENST00000475551 MYH3P11055 1940 aa19.6■□□□□ 0.73
CCM2-207ENST00000475551 ADAMTS3O15072 1205 aa19.6■□□□□ 0.73
CCM2-207ENST00000475551 ASTE1Q2TB18 679 aaPredicted RBP19.6■□□□□ 0.73
CCM2-207ENST00000475551 COBLL1Q53SF7 1204 aa19.6■□□□□ 0.73
CCM2-207ENST00000475551 SDR42E1Q8WUS8 393 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms