RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PRKAG2Q9UGJ0 569 aa18.09■□□□□ 0.49
CPSF3-203ENST00000475482 KIAA0355O15063 1070 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 PTGS1P23219 599 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 EEPD1Q7L9B9 569 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 FBXO11Q86XK2 927 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 GLT1D1Q96MS3 346 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 LBHD1Q9BQE6 289 aaPredicted RBP18.08■□□□□ 0.48
CPSF3-203ENST00000475482 RIOX1Q9H6W3 641 aa18.08■□□□□ 0.48
CPSF3-203ENST00000475482 OPLAHO14841 1288 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 PPP1R11O60927 126 aaPredicted RBP18.07■□□□□ 0.48
CPSF3-203ENST00000475482 CLTBP09497 229 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 ITGB8P26012 769 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 BEX3Q00994 111 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 FAAP100Q0VG06 881 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 WTAPQ15007 396 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 FSCN1Q16658 493 aaKnown RBP18.07■□□□□ 0.48
CPSF3-203ENST00000475482 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 CHST3Q7LGC8 479 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 MCF2L2Q86YR7 1114 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 FBXL16Q8N461 479 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 SLC43A3Q8NBI5 491 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 SYTL5Q8TDW5 730 aaPredicted RBP18.07■□□□□ 0.48
CPSF3-203ENST00000475482 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 VAT1LQ9HCJ6 419 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 COL20A1Q9P218 1284 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
CPSF3-203ENST00000475482 KIAA1217Q5T5P2 1943 aa18.07■□□□□ 0.48
CPSF3-203ENST00000475482 ERICH2A1L162 156 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 ARVCFO00192 962 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 ZBTB5O15062 677 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
CPSF3-203ENST00000475482 CYTH3O43739 400 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 CABYRO75952 493 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 CPA1P15085 419 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 COL9A3Q14050 684 aaPredicted RBP18.06■□□□□ 0.48
CPSF3-203ENST00000475482 SART3Q15020 963 aaKnown RBP18.06■□□□□ 0.48
CPSF3-203ENST00000475482 LRCH3Q96II8 777 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 AMNQ9BXJ7 453 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 WDR11Q9BZH6 1224 aa18.06■□□□□ 0.48
CPSF3-203ENST00000475482 MROH7Q68CQ1 1323 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 A0A0U1RQG5 324 aaPredicted RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 PQBP1O60828 265 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 HSD17B4P51659 736 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 SAMD3Q8N6K7 520 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 BADQ92934 168 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 TMEM87BQ96K49 555 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 TAAR1Q96RJ0 339 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 MPHOSPH6Q99547 160 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 AP5M1Q9H0R1 490 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 LY9Q9HBG7 655 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 PRDM5Q9NQX1 630 aaPredicted RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 MAP3K20Q9NYL2 800 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 TBX21Q9UL17 535 aa18.05■□□□□ 0.48
CPSF3-203ENST00000475482 LAMA2P24043 3122 aaKnown RBP18.05■□□□□ 0.48
CPSF3-203ENST00000475482 SCN10AQ9Y5Y9 1956 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 GRIN2DO15399 1336 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 B4DLN1 442 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 DHX16O60231 1041 aaKnown RBP18.04■□□□□ 0.48
CPSF3-203ENST00000475482 MRPL12P52815 198 aaKnown RBP18.04■□□□□ 0.48
CPSF3-203ENST00000475482 PDE4DQ08499 809 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 CXCL17Q6UXB2 119 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 Q6ZUG5 572 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 FAM126BQ8IXS8 530 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 NSUN6Q8TEA1 469 aaKnown RBP18.04■□□□□ 0.48
CPSF3-203ENST00000475482 IWS1Q96ST2 819 aa18.04■□□□□ 0.48
CPSF3-203ENST00000475482 GPHNQ9NQX3 736 aaPredicted RBP18.04■□□□□ 0.48
CPSF3-203ENST00000475482 NKRFO15226 690 aaKnown RBP eCLIP18.03■□□□□ 0.48
CPSF3-203ENST00000475482 PRC1O43663 620 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 ZEB2O60315 1214 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 CD4P01730 458 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 SMARCA1P28370 1054 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 LIFRP42702 1097 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 CUL4AQ13619 759 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 CCDC62Q6P9F0 684 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 SCFD2Q8WU76 684 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 SEZ6LQ9BYH1 1024 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 TMEM39AQ9NV64 488 aa18.03■□□□□ 0.48
CPSF3-203ENST00000475482 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.03■□□□□ 0.48
CPSF3-203ENST00000475482 SH2B2O14492 632 aaPredicted RBP18.02■□□□□ 0.48
CPSF3-203ENST00000475482 DDAH1O94760 285 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.48
CPSF3-203ENST00000475482 CATIPQ7Z7H3 387 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 TMTC2Q8N394 836 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 PIGSQ96S52 555 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 RMDN3Q96TC7 470 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 CIZ1Q9ULV3 898 aaPredicted RBP18.02■□□□□ 0.48
CPSF3-203ENST00000475482 PCDHA1Q9Y5I3 950 aa18.02■□□□□ 0.48
CPSF3-203ENST00000475482 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 A6NJR5 290 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 ARIH2O95376 493 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 TIMP1P01033 207 aa18.01■□□□□ 0.47
CPSF3-203ENST00000475482 TRAF1Q13077 416 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms