RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 FBXO16Q8IX29 292 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 MTMR8Q96EF0 704 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 PURBQ96QR8 312 aaKnown RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 YY1AP1Q9H869 796 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 Q9Y3F1 56 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 ELP1O95163 1332 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 PLXNA1Q9UIW2 1896 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 ADCY6O43306 1168 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 PRC1O43663 620 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 DDAH1O94760 285 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 EDNRBP24530 442 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 KIF5BP33176 963 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 PDE4DQ08499 809 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 GNASQ5JWF2 1037 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 TAPT1Q6NXT6 567 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
HLA-DOB-208ENST00000475235 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 MYADML2A6NDP7 307 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 ZEB2O60315 1214 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 ASGR1P07306 291 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 SMPD1P17405 629 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 FXR1P51114 621 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
HLA-DOB-208ENST00000475235 MROH7Q68CQ1 1323 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 CABYRO75952 493 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 CALM1P0DP23 149 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 CALM2P0DP24 149 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 CALM3P0DP25 149 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 LIFRP42702 1097 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 NBR1Q14596 966 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 DUSP28Q4G0W2 176 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 UBE2OQ9C0C9 1292 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 PRDM5Q9NQX1 630 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 PCDHA1Q9Y5I3 950 aa13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 ZNFX1Q9P2E3 1918 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-208ENST00000475235 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 NKRFO15226 690 aaKnown RBP eCLIP13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 DYNC1LI2O43237 492 aaPredicted RBP13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 CLTBP09497 229 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 SMARCA1P28370 1054 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 GNAQP50148 359 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 GHRHRQ02643 423 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 TLE2Q04725 743 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 KRT32Q14532 448 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 ANKRD33Q7Z3H0 272 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 PIGSQ96S52 555 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 SEZ6LQ9BYH1 1024 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 WDR11Q9BZH6 1224 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
HLA-DOB-208ENST00000475235 PNMA6FA0A0J9YX94 578 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 DCDC2CA8MYV0 355 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 CTAGE5O15320 804 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 CFBP00751 764 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 HSD17B4P51659 736 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 SPZ1Q9BXG8 430 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 SLC12A7Q9Y666 1083 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 ALPK3Q96L96 1907 aa13.3□□□□□ -0.28
HLA-DOB-208ENST00000475235 CYTH3O43739 400 aa13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 PPP1R11O60927 126 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 KIF20AO95235 890 aa13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 TPM2P07951 284 aa13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 CPT1AP50416 773 aa13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
HLA-DOB-208ENST00000475235 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms