RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 STOX1Q6ZVD7 989 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 FBXO11Q86XK2 927 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 CCDC136Q96JN2 1154 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 UPF3AQ9H1J1 476 aaKnown RBP10.98□□□□□ -0.65
PDPN-204ENST00000475043 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 VTA1Q9NP79 307 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 ANO2Q9NQ90 1003 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 ABCB11O95342 1321 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 DCDC2CA8MYV0 355 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 B4DLN1 442 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 CLTBP09497 229 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 SMPD1P17405 629 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 PTGS1P23219 599 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 BMP2KLQ5H9B9 411 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 IQSEC1Q6DN90 963 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 CCSAPQ6IQ19 270 aaPredicted RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 TAPT1Q6NXT6 567 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 DNERQ8NFT8 737 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 SENP2Q9HC62 589 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 MAD2L2Q9UI95 211 aa10.97□□□□□ -0.65
PDPN-204ENST00000475043 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
PDPN-204ENST00000475043 ELP1O95163 1332 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 LOC102724159A0A0B4J2E5 919 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 TRIM43BA6NCK2 446 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 PALM3A6NDB9 673 aaPredicted RBP10.96□□□□□ -0.65
PDPN-204ENST00000475043 SOX1O00570 391 aaPredicted RBP10.96□□□□□ -0.65
PDPN-204ENST00000475043 RAG1P15918 1043 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 PWP2Q15269 919 aaKnown RBP10.96□□□□□ -0.65
PDPN-204ENST00000475043 FSCN1Q16658 493 aaKnown RBP10.96□□□□□ -0.65
PDPN-204ENST00000475043 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 CASC1Q6TDU7 716 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 CATIPQ7Z7H3 387 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 MCF2L2Q86YR7 1114 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 TBC1D5Q92609 795 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 BADQ92934 168 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 TRIM43Q96BQ3 446 aaPredicted RBP10.96□□□□□ -0.65
PDPN-204ENST00000475043 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.65
PDPN-204ENST00000475043 MROH7Q68CQ1 1323 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 A0A0U1RQG5 324 aaPredicted RBP10.95□□□□□ -0.66
PDPN-204ENST00000475043 SLC27A2O14975 620 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 ZBTB5O15062 677 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 CTAGE5O15320 804 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 PRC1O43663 620 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 ZEB2O60315 1214 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 CFBP00751 764 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 ANTXR2P58335 489 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 FAAP100Q0VG06 881 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 GRM4Q14833 912 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 DUSP28Q4G0W2 176 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 ANKRD33Q7Z3H0 272 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
PDPN-204ENST00000475043 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 TAAR1Q96RJ0 339 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 Q9Y3F1 56 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 PCDHA1Q9Y5I3 950 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 TRIOBPQ9H2D6 2365 aa10.95□□□□□ -0.66
PDPN-204ENST00000475043 RANBP2P49792 3224 aaKnown RBP10.94□□□□□ -0.66
PDPN-204ENST00000475043 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 CCDC69A6NI79 296 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 ARVCFO00192 962 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 TLR3O15455 904 aaKnown RBP10.94□□□□□ -0.66
PDPN-204ENST00000475043 NEFLP07196 543 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 EDNRBP24530 442 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 MCM5P33992 734 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 TROAPQ12815 778 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 PPP2R5BQ15173 497 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 NECTIN1Q15223 517 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 LRIT3Q3SXY7 679 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 CREB3L3Q68CJ9 461 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
PDPN-204ENST00000475043 SYTL5Q8TDW5 730 aaPredicted RBP10.94□□□□□ -0.66
PDPN-204ENST00000475043 NSUN6Q8TEA1 469 aaKnown RBP10.94□□□□□ -0.66
PDPN-204ENST00000475043 SCFD2Q8WU76 684 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 PIBF1Q8WXW3 757 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 TOX2Q96NM4 488 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 PIGSQ96S52 555 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
PDPN-204ENST00000475043 KIAA0355O15063 1070 aa10.93□□□□□ -0.66
PDPN-204ENST00000475043 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms