RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 GRM4Q14833 912 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 RIOX1Q9H6W3 641 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 MAD2L2Q9UI95 211 aa16.31■□□□□ 0.2
DNMT3A-211ENST00000474887 HSD17B4P51659 736 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 EPHB4P54760 987 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 TROAPQ12815 778 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 ARHGEF16Q5VV41 709 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 STOX1Q6ZVD7 989 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 Q7L0L9 218 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 ALDH8A1Q9H2A2 487 aaPredicted RBP16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 HIPK3Q9H422 1215 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
DNMT3A-211ENST00000474887 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 GH1P01241 217 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 KIF5BP33176 963 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 GNAQP50148 359 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 IRX6P78412 446 aaPredicted RBP16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 CENPQQ7L2Z9 268 aaPredicted RBP16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 SLC17A8Q8NDX2 589 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 SEMA6BQ9H3T3 888 aa16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-211ENST00000474887 CFBP00751 764 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 NR3C2P08235 984 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 PFKMP08237 780 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 TGFB3P10600 412 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 MCM5P33992 734 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 TMEM240Q5SV17 173 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 TMEM87BQ96K49 555 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 NOC4LQ9BVI4 516 aaKnown RBP16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 PXMP2Q9NR77 195 aa16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 RBM8AQ9Y5S9 174 aaKnown RBP16.28■□□□□ 0.2
DNMT3A-211ENST00000474887 GCOM1H8Y6P7 765 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 B4GALT4O60513 344 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 DDAH1O94760 285 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 FGBP02675 491 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 MYL3P08590 195 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 POLR2MP0CAP2 368 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CALM1P0DP23 149 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CALM2P0DP24 149 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CALM3P0DP25 149 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CSF2RAP15509 400 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 RFC2P35250 354 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 TMEM63BQ5T3F8 832 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 C16orf59Q7L2K0 433 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 CTCFLQ8NI51 663 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 HERVK_113Q902F9 699 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.27■□□□□ 0.22e-7■■□□□ 12.3
DNMT3A-211ENST00000474887 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
DNMT3A-211ENST00000474887 LRRC37A2A6NM11 1700 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 STAM2O75886 525 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 CYP2C18P33260 490 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 LIFRP42702 1097 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 PSMC6P62333 389 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 SEPT14Q6ZU15 432 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 PPP1R12CQ9BZL4 782 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 A0A0C4DFX4 3053 aa16.26■□□□□ 0.19
DNMT3A-211ENST00000474887 LCTP09848 1927 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 BFSP2Q13515 415 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 DGKDQ16760 1214 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 XRRA1Q6P2D8 792 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 ZNF365Q70YC5 407 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 GUCD1Q96NT3 240 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
DNMT3A-211ENST00000474887 OPLAHO14841 1288 aa16.24■□□□□ 0.19
DNMT3A-211ENST00000474887 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms