RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 CPXCR1Q8N123 301 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 C17orf53Q8N3J3 647 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MSL3Q8N5Y2 521 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RGS22Q8NE09 1264 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NUP133Q8WUM0 1156 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 TRERF1Q96PN7 1200 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 UBA5Q9GZZ9 404 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ZSCAN16Q9H4T2 348 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RIOX1Q9H6W3 641 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NCOA5Q9HCD5 579 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RNF146Q9NTX7 359 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MRPL11Q9Y3B7 192 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MRVI1Q9Y6F6 885 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF536O15090 1300 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NID2Q14112 1375 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 LOC102724159A0A0B4J2E5 919 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PNMA6FA0A0J9YX94 578 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 KLF18A0A0U1RQI7 1052 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 B4DLN1 442 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PITPNM1O00562 1244 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ZBTB5O15062 677 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PEX10O60683 326 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ALAS1P13196 640 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PDIA3P30101 505 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MRPL12P52815 198 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 CAP1Q01518 475 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 PWP2Q15269 919 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 UTP14CQ5TAP6 766 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 APOA5Q6Q788 366 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF467Q7Z7K2 595 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 FBXO11Q86XK2 927 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MCF2L2Q86YR7 1114 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 TEX2Q8IWB9 1127 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 ANKRD35Q8N283 1001 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NSUN7Q8NE18 718 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 SMARCC2Q8TAQ2 1214 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 FAM200AQ8TCP9 573 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 BICD2Q8TD16 824 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 CHMP4CQ96CF2 233 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MTMR8Q96EF0 704 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RRP36Q96EU6 259 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 AGBL1Q96MI9 1066 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MPHOSPH6Q99547 160 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 AMNQ9BXJ7 453 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 AGXT2Q9BYV1 514 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 JMJD4Q9H9V9 463 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 SENP2Q9HC62 589 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 GPHNQ9NQX3 736 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 MAP3K20Q9NYL2 800 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 BIN2Q9UBW5 565 aaPredicted RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 SEC63Q9UGP8 760 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 NRBP1Q9UHY1 535 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 CFAP45Q9UL16 551 aa4.77□□□□□ -1.65
GAPVD1-216ENST00000474637 RBBP6Q7Z6E9 1792 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 PTPDC1A2A3K4 754 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 GOLGA8AA7E2F4 631 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 GOLGA8BA8MQT2 603 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 hCG_1984214I3L0E3 225 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ECM2O94769 699 aaPredicted RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 CYP2B6P20813 491 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ADD1P35611 737 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 METAP2P50579 478 aaKnown RBP eCLIP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 EVCP57679 992 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 RTN1Q16799 776 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 QRICH1Q2TAL8 776 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ANO6Q4KMQ2 910 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 TMTC3Q6ZXV5 915 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 RASGRP2Q7LDG7 609 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 STAG2Q8N3U4 1231 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF713Q8N859 430 aaPredicted RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 PIBF1Q8WXW3 757 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF333Q96JL9 665 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 LLPHQ9BRT6 129 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 CBX8Q9HC52 389 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 VAT1LQ9HCJ6 419 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNFX1Q9P2E3 1918 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 SYNGAP1Q96PV0 1343 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ASB14A6NK59 587 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 POTEB2H3BUK9 544 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 INHAP05111 366 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 SNAP25P60880 206 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF792Q3KQV3 632 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 MICU3Q86XE3 530 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF274Q96GC6 653 aaPredicted RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 TMEM106CQ9BVX2 250 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 CLSTN2Q9H4D0 955 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 HOMER2Q9NSB8 354 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 DDX19AQ9NUU7 478 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 CGNQ9P2M7 1197 aaKnown RBP4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 RCOR1Q9UKL0 485 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 RIPK3Q9Y572 518 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 PLXNA1Q9UIW2 1896 aa4.76□□□□□ -1.65
GAPVD1-216ENST00000474637 MYH6P13533 1939 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 RPTORQ8N122 1335 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 DNAJC25-GNG10A0A024R161 153 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 COBLO75128 1261 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms