RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ANKRD35Q8N283 1001 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 SOCS4Q8WXH5 440 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 APBA2Q99767 749 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 NUDT12Q9BQG2 462 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 PDCD2LQ9BRP1 358 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 PXMP2Q9NR77 195 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 DIS3Q9Y2L1 958 aaKnown RBP11.9□□□□□ -0.5
CASC3-204ENST00000474190 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 GNRH1P01148 92 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 CYP2B6P20813 491 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 ALDH5A1P51649 535 aaPredicted RBP11.89□□□□□ -0.51
CASC3-204ENST00000474190 TRAF1Q13077 416 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 MAP3K21Q5TCX8 1036 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 JAKMIP3Q5VZ66 844 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 VSIG10LQ86VR7 867 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 DIS3L2Q8IYB7 885 aaKnown RBP11.89□□□□□ -0.51
CASC3-204ENST00000474190 CCDC148Q8NFR7 591 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 WASF1Q92558 559 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 CUL5Q93034 780 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
CASC3-204ENST00000474190 MKI67P46013 3256 aaKnown RBP11.89□□□□□ -0.51
CASC3-204ENST00000474190 ADCY6O43306 1168 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 ELNP15502 786 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 PTGS1P23219 599 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 SREBF1P36956 1147 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 RGS2P41220 211 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 TOB1P50616 345 aaPredicted RBP11.88□□□□□ -0.51
CASC3-204ENST00000474190 MRPL12P52815 198 aaKnown RBP11.88□□□□□ -0.51
CASC3-204ENST00000474190 NLRP5P59047 1200 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 UBXN2AP68543 259 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 SEMA3FQ13275 785 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 PGM5Q15124 567 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 GALNT17Q6IS24 598 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
CASC3-204ENST00000474190 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 DNERQ8NFT8 737 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 LENG9Q96B70 501 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
CASC3-204ENST00000474190 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
CASC3-204ENST00000474190 NR3C2P08235 984 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
CASC3-204ENST00000474190 ITGB5P18084 799 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 EIF2AK2P19525 551 aaKnown RBP11.87□□□□□ -0.51
CASC3-204ENST00000474190 KCNA4P22459 653 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 GNA11P29992 359 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 CYP2C19P33261 490 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 RESTQ13127 1097 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
CASC3-204ENST00000474190 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 ARMCX2Q7L311 632 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 REXO1Q8N1G1 1221 aaKnown RBP11.87□□□□□ -0.51
CASC3-204ENST00000474190 PXYLP1Q8TE99 480 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
CASC3-204ENST00000474190 MBOAT7Q96N66 472 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 TINF2Q9BSI4 451 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
CASC3-204ENST00000474190 IGLV3-22A0A075B6J6 115 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 FAM86B1E9PN63 330 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 ADCY3O60266 1144 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 ARIH2O95376 493 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 CYP3A4P08684 503 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 FAM86B2P0C5J1 330 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 CYBAP13498 195 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 CIITAP33076 1130 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 KIF22Q14807 665 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
CASC3-204ENST00000474190 PRAMEF19Q5SWL8 479 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 FAM184AQ8NB25 1140 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
CASC3-204ENST00000474190 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
CASC3-204ENST00000474190 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
CASC3-204ENST00000474190 BCAS3Q9H6U6 928 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 PDGFCQ9NRA1 345 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
CASC3-204ENST00000474190 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
CASC3-204ENST00000474190 LOC102724159A0A0B4J2E5 919 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 RBM47A0AV96 593 aaKnown RBP11.85□□□□□ -0.51
CASC3-204ENST00000474190 STX6O43752 255 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 BRD1O95696 1058 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
CASC3-204ENST00000474190 HOXD10P28358 340 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 KRT2P35908 639 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 PRMT2P55345 433 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
CASC3-204ENST00000474190 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms