RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 AVPR2P30518 371 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
SSBP1-209ENST00000473783 POLA2Q14181 598 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 PTGISQ16647 500 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 OR6J1Q8NGC5 347 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP1-209ENST00000473783 WDR11Q9BZH6 1224 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
SSBP1-209ENST00000473783 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
SSBP1-209ENST00000473783 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 ZNF532Q9HCE3 1301 aa12.61□□□□□ -0.39
SSBP1-209ENST00000473783 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 NBNO60934 754 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 NBL1P41271 181 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 CLUL1Q15846 466 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-209ENST00000473783 EAF2Q96CJ1 260 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-209ENST00000473783 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 CYP39A1Q9NYL5 469 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
SSBP1-209ENST00000473783 LOC102724159A0A0B4J2E5 919 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 RBM47A0AV96 593 aaKnown RBP12.59□□□□□ -0.39
SSBP1-209ENST00000473783 A6NJR5 290 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
SSBP1-209ENST00000473783 AMHP03971 560 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-209ENST00000473783 PWP2Q15269 919 aaKnown RBP12.59□□□□□ -0.39
SSBP1-209ENST00000473783 SESTD1Q86VW0 696 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 PPP1R13LQ8WUF5 828 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 ASIC4Q96FT7 647 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 CTAGE1Q96RT6 745 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 CD207Q9UJ71 328 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
SSBP1-209ENST00000473783 DMDP11532 3685 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 LOC730098B7Z3J9 87 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 PRKAB2O43741 272 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 TBX10O75333 385 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 CKBP12277 381 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 TMEM192Q8IY95 271 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 BAHCC1Q9P281 2608 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.4
SSBP1-209ENST00000473783 MYH7P12883 1935 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 ZBED9Q6R2W3 1325 aa12.58□□□□□ -0.4
SSBP1-209ENST00000473783 WDR87Q6ZQQ6 2873 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 KDM4AO75164 1064 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 KRT37O76014 449 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 EYA4O95677 639 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 ALAS1P13196 640 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 STAT2P52630 851 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 HYAL1Q12794 435 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-209ENST00000473783 PPP2R5BQ15173 497 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 GDF6Q6KF10 455 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-209ENST00000473783 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 YME1L1Q96TA2 773 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
SSBP1-209ENST00000473783 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
SSBP1-209ENST00000473783 LGR5O75473 907 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 RGS20O76081 388 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 MBD4O95243 580 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 BMP3P12645 472 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 RASA1P20936 1047 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 MCTP2Q6DN12 878 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
SSBP1-209ENST00000473783 FAM160B2Q86V87 743 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
SSBP1-209ENST00000473783 NKD2Q969F2 451 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-209ENST00000473783 MKL1Q969V6 931 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 CHD8Q9HCK8 2581 aa12.56□□□□□ -0.4
SSBP1-209ENST00000473783 DMXL1Q9Y485 3027 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-209ENST00000473783 TMEM232C9JQI7 657 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-209ENST00000473783 CHMP4BP1P59074 171 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 MUM1L1Q5H9M0 696 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 SMRP1Q8NCR6 262 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 SCFD2Q8WU76 684 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 CHURC1Q8WUH1 139 aa12.55□□□□□ -0.4
SSBP1-209ENST00000473783 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms