RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SELENOOQ9BVL4 669 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 RSPH14Q9UHP6 348 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 ROBO3Q96MS0 1386 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 USP17L5A8MUK1 530 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 LAD1O00515 517 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 PRPHP41219 470 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 FAM114A1Q8IWE2 563 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 CCDC42Q96M95 316 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 DRC1Q96MC2 740 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 NUDT12Q9BQG2 462 aa23.5■■□□□ 1.35
COL18A1-207ENST00000473212 RPS6KA4O75676 772 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 EIF6P56537 245 aaKnown RBP23.49■■□□□ 1.35
COL18A1-207ENST00000473212 SEMA3FQ13275 785 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 CCDC96Q2M329 555 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.49■■□□□ 1.35
COL18A1-207ENST00000473212 COA7Q96BR5 231 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 CRACR2AQ9BSW2 395 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 CUEDC2Q9H467 287 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 FAM207AQ9NSI2 230 aaPredicted RBP23.49■■□□□ 1.35
COL18A1-207ENST00000473212 EDIL3O43854 480 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 WDR66Q8TBY9 1149 aa23.49■■□□□ 1.35
COL18A1-207ENST00000473212 MYH10P35580 1976 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 POTEMA6NI47 508 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 SLC37A4O43826 429 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 SPA17Q15506 151 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 GALNT17Q6IS24 598 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 BARGINQ6ZT62 677 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 NEK8Q86SG6 692 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 CCDC155Q8N6L0 562 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 ERGIC2Q96RQ1 377 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 C7orf25Q9BPX7 421 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 MAGEF1Q9HAY2 307 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 NAV1Q8NEY1 1877 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 MYMKA6NI61 221 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 TDP2O95551 362 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 BAG3O95817 575 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 GRB10Q13322 594 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 FKBP15Q5T1M5 1219 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 ZSCAN29Q8IWY8 852 aaPredicted RBP23.48■■□□□ 1.35
COL18A1-207ENST00000473212 BLOC1S4Q9NUP1 217 aa23.48■■□□□ 1.35
COL18A1-207ENST00000473212 AGPSO00116 658 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 AK8Q96MA6 479 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 PSMB7Q99436 277 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 MLXIPQ9HAP2 919 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 SMARCAL1Q9NZC9 954 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 CAPN6Q9Y6Q1 641 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 A0A1W2PQJ5 194 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 CDK17Q00537 523 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 LRRC41Q15345 812 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 KCNK18Q7Z418 384 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 CREG2Q8IUH2 290 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 TSGA10Q9BZW7 698 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 SNX12Q9UMY4 172 aa23.47■■□□□ 1.35
COL18A1-207ENST00000473212 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
COL18A1-207ENST00000473212 EZH2Q15910 746 aaKnown RBP23.46■■□□□ 1.35
COL18A1-207ENST00000473212 FIGNQ5HY92 759 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 IQCEQ6IPM2 695 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 TMED8Q6PL24 325 aaPredicted RBP23.46■■□□□ 1.35
COL18A1-207ENST00000473212 C2CD5Q86YS7 1000 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 AMOTL1Q8IY63 956 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 PNMA5Q96PV4 448 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 SPZ1Q9BXG8 430 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 SLURP2P0DP57 97 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 GPSM2P81274 684 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 KRT25Q7Z3Z0 450 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 IFIH1Q9BYX4 1025 aaKnown RBP23.46■■□□□ 1.35
COL18A1-207ENST00000473212 EHD2Q9NZN4 543 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 ARHGAP20Q9P2F6 1191 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 JRKLQ9Y4A0 524 aa23.46■■□□□ 1.35
COL18A1-207ENST00000473212 AHDC1Q5TGY3 1603 aaPredicted RBP23.45■■□□□ 1.34
COL18A1-207ENST00000473212 PPP4CP60510 307 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 LRRC47Q8N1G4 583 aaKnown RBP23.45■■□□□ 1.34
COL18A1-207ENST00000473212 FNBP4Q8N3X1 1017 aaPredicted RBP23.45■■□□□ 1.34
COL18A1-207ENST00000473212 TRIM58Q8NG06 486 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 HDAC7Q8WUI4 952 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 RRP36Q96EU6 259 aaKnown RBP23.45■■□□□ 1.34
COL18A1-207ENST00000473212 C6orf50Q9HD87 102 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 PCDHA13Q9Y5I0 950 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 CDK5RAP2Q96SN8 1893 aa23.45■■□□□ 1.34
COL18A1-207ENST00000473212 USO1O60763 962 aaKnown RBP23.44■■□□□ 1.34
COL18A1-207ENST00000473212 MOCS3O95396 460 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 PLAGL2Q9UPG8 496 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 ANKRD65E5RJM6 399 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 TACC1O75410 805 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 SKIDA1Q1XH10 827 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 CNNM4Q6P4Q7 775 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 C16orf86Q6ZW13 317 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 REXO1Q8N1G1 1221 aaKnown RBP23.44■■□□□ 1.34
COL18A1-207ENST00000473212 ANKRD13CQ8N6S4 541 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 LRRC1Q9BTT6 524 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 SH2D4AQ9H788 454 aa23.44■■□□□ 1.34
COL18A1-207ENST00000473212 CCNL1Q9UK58 526 aaPredicted RBP23.44■■□□□ 1.34
COL18A1-207ENST00000473212 RTCBQ9Y3I0 505 aaKnown RBP23.44■■□□□ 1.34
COL18A1-207ENST00000473212 GRAPQ13588 217 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 CCDC70Q6NSX1 233 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 GRAPLQ8TC17 118 aaPredicted RBP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 AENQ8WTP8 325 aaKnown RBP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 GOLGA6BA6NDN3 693 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 CXCR5P32302 372 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms