RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CORO1BQ9BR76 489 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 MTA3Q9BTC8 594 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 PHF20Q9BVI0 1012 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 STARD13Q9Y3M8 1113 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 TARBP1Q13395 1621 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 MAPKBP1O60336 1514 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 MAGI1Q96QZ7 1491 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 KLRG2A4D1S0 409 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 CDC14CA4D256 554 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA6CA6NDK9 693 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA6BA6NDN3 693 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 AGRPO00253 132 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 AXIN1O15169 862 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 MAFGO15525 162 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 WFS1O76024 890 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA6DP0CG33 693 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 RHCEP18577 417 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 ABCB4P21439 1286 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 CHKAP35790 457 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 DNM2P50570 870 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 CCT2P78371 535 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 RHDQ02161 417 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 KLF1Q13351 362 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 SEC23AQ15436 765 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 NBPF12Q5TAG4 269 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 CRTC3Q6UUV7 619 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 MTDHQ86UE4 582 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 CDH24Q86UP0 819 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 KRTAP1-3Q8IUG1 177 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GRAMD1CQ8IYS0 662 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 FRS2Q8WU20 508 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 RELTQ969Z4 430 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 ZNF496Q96IT1 587 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 LRFN3Q9BTN0 628 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 WNT10AQ9GZT5 417 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 ADAM19Q9H013 955 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 DDX21Q9NR30 783 aaKnown RBP eCLIP3.33□□□□□ -1.88
XRN1-210ENST00000472697 ATG3Q9NT62 314 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 MKS1Q9NXB0 559 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GFOD1Q9NXC2 390 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GOLGA6AQ9NYA3 693 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GGA3Q9NZ52 723 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 ABHD14A-ACY1A0A1B0GW23 586 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 FSCN2O14926 492 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 AOC2O75106 756 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GBP1P32455 592 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 SARSP49591 514 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 PPM1FP49593 454 aaPredicted RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 GABREP78334 506 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 PURAQ00577 322 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 SRSF2Q01130 221 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 GBX1Q14549 363 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 INF2Q27J81 1249 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 MINDY4Q4G0A6 757 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 FAM26FQ5R3K3 315 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 IFIT1BQ5T764 474 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 SLC6A19Q695T7 634 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 ZC3H7AQ8IWR0 971 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 CCDC155Q8N6L0 562 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 CELF5Q8N6W0 485 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 RUNDC1Q96C34 613 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 VWCEQ96DN2 955 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 KCNJ15Q99712 375 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 RTEL1Q9NZ71 1219 aa3.33□□□□□ -1.88
XRN1-210ENST00000472697 GMPR2Q9P2T1 348 aaKnown RBP3.33□□□□□ -1.88
XRN1-210ENST00000472697 TCRBV5S4A2TA0A5A2 114 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 LRRC10BA6NIK2 292 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 TMPRSS2O15393 492 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 DEAF1O75398 565 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 C5AR1P21730 350 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 PIK3CBP42338 1070 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 MORC3Q14149 939 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 DNMBPQ6XZF7 1577 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 GPR155Q7Z3F1 870 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 LIX1LQ8IVB5 337 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 MICALL1Q8N3F8 863 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 C18orf8Q96DM3 657 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 IPO9Q96P70 1041 aaKnown RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 INO80BQ9C086 356 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 PRDM14Q9GZV8 571 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 NKX2-4Q9H2Z4 354 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 JPH1Q9HDC5 661 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 PRDM6Q9NQX0 595 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 CCM2LQ9NUG4 571 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 FAM105AQ9NUU6 356 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 OXSMQ9NWU1 459 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 GPR52Q9Y2T5 361 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SAMM50Q9Y512 469 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SPATA31D1Q6ZQQ2 1576 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SLC35F4A4IF30 521 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 CTNND1O60716 968 aaKnown RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 HTR3AP46098 478 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 ZNF280AP59817 542 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 TMEM177Q53S58 311 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 ZNF468Q5VIY5 522 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 LILRA6Q6PI73 481 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 LDHAL6AQ6ZMR3 332 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 ARHGEF39Q8N4T4 335 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 ENAHQ8N8S7 591 aaPredicted RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 OR2W6PQ8NHA6 318 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms