RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 EFCAB13Q8IY85 973 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 CCDC148Q8NFR7 591 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 SPATA20Q8TB22 786 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 GDAP1L1Q96MZ0 367 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 ZMYND12Q9H0C1 365 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 RIOX1Q9H6W3 641 aa14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 GEMIN8Q9NWZ8 242 aaKnown RBP14.79□□□□□ -0.04
SCAMP4-207ENST00000472442 C10orf71Q711Q0 1435 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 AARSP49588 968 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 SHROOM1Q2M3G4 852 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 CDKAL1Q5VV42 579 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 IDI2Q9BXS1 227 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 EHD4Q9H223 541 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 GREB1LQ9C091 1923 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 FAM196BA6NMK8 535 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 COBLO75128 1261 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 TTLL1O95922 423 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 HLA-DOAP06340 250 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 CUL4BQ13620 913 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 DNAJC21Q5F1R6 531 aaKnown RBP14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 GALNT17Q6IS24 598 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 TMTC1Q8IUR5 882 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 VIPAS39Q9H9C1 493 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 ABHD10Q9NUJ1 306 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 SERPINA10Q9UK55 444 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 HPCAL4Q9UM19 191 aa14.78□□□□□ -0.04
SCAMP4-207ENST00000472442 KANK3Q6NY19 840 aa14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 TADA2BQ86TJ2 420 aa14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 CCDC51Q96ER9 411 aa14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 CTAGE1Q96RT6 745 aa14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 TRIM10Q9UDY6 481 aa14.77□□□□□ -0.04
SCAMP4-207ENST00000472442 RNF225M0QZC1 329 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 KCNA3P22001 575 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 FECHP22830 423 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 DEF6Q9H4E7 631 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.05
SCAMP4-207ENST00000472442 CCDC194A0A1B0GVG4 234 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 ENC1O14682 589 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 USP14P54578 494 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 NAPAP54920 295 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 INF2Q27J81 1249 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 SH3RF1Q7Z6J0 888 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 MICALL1Q8N3F8 863 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 HDAC6Q9UBN7 1215 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 CPP00450 1065 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 NUP88Q99567 741 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 GUCA1BQ9UMX6 200 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 SMCO2A6NFE2 343 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 ZMYND10O75800 440 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 E2F4Q16254 413 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 ASPRV1Q53RT3 343 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 CYP26C1Q6V0L0 522 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 GSPT2Q8IYD1 628 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 DHX36Q9H2U1 1008 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 TDRD3Q9H7E2 651 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 ZC3H4Q9UPT8 1303 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-207ENST00000472442 ITIH6Q6UXX5 1313 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 TTLL6Q8N841 843 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 PAGE5Q96GU1 130 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 PI4KBQ9UBF8 816 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 A0A087WUV0 522 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 N4BP3O15049 544 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 GGCXP38435 758 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 ZNF543Q08ER8 600 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 DPYDQ12882 1025 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 STIM1Q13586 685 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 MAP9Q49MG5 647 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 ARL6IP4Q66PJ3 421 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 TTBK2Q6IQ55 1244 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 TRAPPC11Q7Z392 1133 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 SUPT20HQ8NEM7 779 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 SEC63Q9UGP8 760 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 CTNND2Q9UQB3 1225 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 COL4A5P29400 1685 aa14.75□□□□□ -0.05
SCAMP4-207ENST00000472442 LOC102724159A0A0B4J2E5 919 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 SRGAP2O75044 1071 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 PWP2Q15269 919 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 KRT31Q15323 416 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 COG1Q8WTW3 980 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 VPS16Q9H269 839 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 PPP1R3GB7ZBB8 358 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 BAG6P46379 1132 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 MMS22LQ6ZRQ5 1243 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 CAPZA3Q96KX2 299 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 CCDC17Q96LX7 622 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 REXO2Q9Y3B8 237 aaKnown RBP14.74□□□□□ -0.05
SCAMP4-207ENST00000472442 DPEP1P16444 411 aa14.73□□□□□ -0.05
SCAMP4-207ENST00000472442 KRT9P35527 623 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms