RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 LZTS2Q9BRK4 669 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
SSR4-208ENST00000471880 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 KLF18A0A0U1RQI7 1052 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 MOXD2PA6NHM9 499 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 GCOM1H8Y6P7 765 aaPredicted RBP17.12■□□□□ 0.33
SSR4-208ENST00000471880 ZBTB43O43298 467 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 ZEB2O60315 1214 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 POLR2MP0CAP2 368 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 MAGEA10P43363 369 aaPredicted RBP17.12■□□□□ 0.33
SSR4-208ENST00000471880 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
SSR4-208ENST00000471880 FSCN1Q16658 493 aaKnown RBP17.12■□□□□ 0.33
SSR4-208ENST00000471880 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 FANCBQ8NB91 859 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 MAP3K14Q99558 947 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 GDF15Q99988 308 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 UPF3AQ9H1J1 476 aaKnown RBP17.12■□□□□ 0.33
SSR4-208ENST00000471880 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
SSR4-208ENST00000471880 GOLGA8AA7E2F4 631 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 CTAGE5O15320 804 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 TXNP10599 105 aaKnown RBP17.11■□□□□ 0.33
SSR4-208ENST00000471880 HSPA4P34932 840 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 TLE2Q04725 743 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 STXBP2Q15833 593 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 RTN1Q16799 776 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 APOA5Q6Q788 366 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
SSR4-208ENST00000471880 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 CUL5Q93034 780 aa17.11■□□□□ 0.33
SSR4-208ENST00000471880 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
SSR4-208ENST00000471880 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
SSR4-208ENST00000471880 MYL3P08590 195 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
SSR4-208ENST00000471880 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
SSR4-208ENST00000471880 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
SSR4-208ENST00000471880 TTLL4Q14679 1199 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 DUSP28Q4G0W2 176 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
SSR4-208ENST00000471880 Q6ZUG5 572 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 SGMS1Q86VZ5 419 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 COPS5Q92905 334 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
SSR4-208ENST00000471880 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 OPLAHO14841 1288 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 EDNRBP24530 442 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 PSMA5P28066 241 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 HSD17B4P51659 736 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 SNX17Q15036 470 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 BRDTQ58F21 947 aaPredicted RBP17.09■□□□□ 0.33
SSR4-208ENST00000471880 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 HEATR3Q7Z4Q2 680 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 BRF1Q92994 677 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
SSR4-208ENST00000471880 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 MAF1Q9H063 256 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
SSR4-208ENST00000471880 BRPF3Q9ULD4 1205 aa17.09■□□□□ 0.33
SSR4-208ENST00000471880 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
SSR4-208ENST00000471880 SORBS3O60504 671 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 NR3C2P08235 984 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 CLTBP09497 229 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 CPT1AP50416 773 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 TMEM39AQ9NV64 488 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
SSR4-208ENST00000471880 ELP1O95163 1332 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 SOX1O00570 391 aaPredicted RBP17.07■□□□□ 0.32
SSR4-208ENST00000471880 SMARCA1P28370 1054 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 CCND2P30279 289 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.323e-6■■■■□ 21.8
SSR4-208ENST00000471880 PSMC6P62333 389 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 LY6KQ17RY6 165 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 SH3RF1Q7Z6J0 888 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SSR4-208ENST00000471880 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
SSR4-208ENST00000471880 Q9Y3F1 56 aa17.07■□□□□ 0.32
SSR4-208ENST00000471880 DOCK5Q9H7D0 1870 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 RBM47A0AV96 593 aaKnown RBP17.06■□□□□ 0.32
SSR4-208ENST00000471880 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSR4-208ENST00000471880 TLR3O15455 904 aaKnown RBP17.06■□□□□ 0.32
SSR4-208ENST00000471880 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
SSR4-208ENST00000471880 ARIH2O95376 493 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 RAG1P15918 1043 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 PGM5Q15124 567 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 FAM47CQ5HY64 1035 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms