RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 TTLL4Q14679 1199 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 PPP2R5BQ15173 497 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 STXBP2Q15833 593 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 SLC35G1Q2M3R5 365 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 BRDTQ58F21 947 aaPredicted RBP17.4■□□□□ 0.38
VPS8-221ENST00000471655 MFSD5Q6N075 450 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 CHST3Q7LGC8 479 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 TMTC2Q8N394 836 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 A6NJR5 290 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 KPNA6O60684 536 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
VPS8-221ENST00000471655 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
VPS8-221ENST00000471655 CCDC62Q6P9F0 684 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 DEFB123Q8N688 67 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 OR6J1Q8NGC5 347 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 LY9Q9HBG7 655 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 PCDHA1Q9Y5I3 950 aa17.39■□□□□ 0.37
VPS8-221ENST00000471655 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 SLC27A2O14975 620 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 CYTH3O43739 400 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 EIF3JO75822 258 aaKnown RBP17.38■□□□□ 0.37
VPS8-221ENST00000471655 CFBP00751 764 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 MCM5P33992 734 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 EPHB4P54760 987 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 SMAD3P84022 425 aaKnown RBP17.38■□□□□ 0.37
VPS8-221ENST00000471655 ARHGEF16Q5VV41 709 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 TMEM87BQ96K49 555 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 PIGSQ96S52 555 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 PXMP2Q9NR77 195 aa17.38■□□□□ 0.37
VPS8-221ENST00000471655 PRC1O43663 620 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 DDAH1O94760 285 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 LIFRP42702 1097 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 PPIGQ13427 754 aaKnown RBP eCLIP17.37■□□□□ 0.37
VPS8-221ENST00000471655 CREB3L3Q68CJ9 461 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
VPS8-221ENST00000471655 GPHNQ9NQX3 736 aaPredicted RBP17.37■□□□□ 0.37
VPS8-221ENST00000471655 MTMR10Q9NXD2 777 aa17.37■□□□□ 0.37
VPS8-221ENST00000471655 ARIH2O95376 493 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 NR3C2P08235 984 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 KIF5BP33176 963 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 PSMC6P62333 389 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 Q7L0L9 218 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 ZNF654Q8IZM8 581 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 COPS5Q92905 334 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 LZTS2Q9BRK4 669 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 ANO2Q9NQ90 1003 aa17.36■□□□□ 0.37
VPS8-221ENST00000471655 SH2B2O14492 632 aaPredicted RBP17.35■□□□□ 0.37
VPS8-221ENST00000471655 B4GALT4O60513 344 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 GH1P01241 217 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 MYL3P08590 195 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
VPS8-221ENST00000471655 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 HOMER1Q86YM7 354 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 CTCFLQ8NI51 663 aaPredicted RBP17.35■□□□□ 0.37
VPS8-221ENST00000471655 RNPC3Q96LT9 517 aaKnown RBP17.35■□□□□ 0.37
VPS8-221ENST00000471655 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
VPS8-221ENST00000471655 ALDH8A1Q9H2A2 487 aaPredicted RBP17.35■□□□□ 0.37
VPS8-221ENST00000471655 GCOM1H8Y6P7 765 aaPredicted RBP17.34■□□□□ 0.37
VPS8-221ENST00000471655 POLR2MP0CAP2 368 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 CALM1P0DP23 149 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 CALM2P0DP24 149 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 CALM3P0DP25 149 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 GNAQP50148 359 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 PTPN11Q06124 597 aaPredicted RBP17.34■□□□□ 0.37
VPS8-221ENST00000471655 TSGA10IPQ3SY00 556 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 KIAA1217Q5T5P2 1943 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 NFRKBQ6P4R8 1299 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 KCNV1Q6PIU1 500 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 C16orf59Q7L2K0 433 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
VPS8-221ENST00000471655 TRPV6Q9H1D0 765 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
VPS8-221ENST00000471655 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
VPS8-221ENST00000471655 SCN10AQ9Y5Y9 1956 aa17.33■□□□□ 0.37
VPS8-221ENST00000471655 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 CSF2RAP15509 400 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 CYP2C18P33260 490 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 PGM5Q15124 567 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 TMEM240Q5SV17 173 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 RASIP1Q5U651 963 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.36
VPS8-221ENST00000471655 NOC4LQ9BVI4 516 aaKnown RBP17.33■□□□□ 0.36
VPS8-221ENST00000471655 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 STXBP5LQ9Y2K9 1186 aa17.33■□□□□ 0.36
VPS8-221ENST00000471655 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.32■□□□□ 0.36
VPS8-221ENST00000471655 CDC45O75419 566 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms