RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ATF2P15336 505 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 ATF4P18848 351 aaPredicted RBP6.38□□□□□ -1.39
RBM39-228ENST00000471635 MC3RP41968 323 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 SCRN1Q12765 414 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 NLGN1Q8N2Q7 840 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 BVESQ8NE79 360 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 USP33Q8TEY7 942 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 LGR4Q9BXB1 951 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 GPRC5CQ9NQ84 441 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 FAN1Q9Y2M0 1017 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 EMC9Q9Y3B6 208 aa6.38□□□□□ -1.39
RBM39-228ENST00000471635 TRBV23OR9-2A0A075B6M9 112 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 C7orf72A4D263 438 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 NOP56O00567 594 aaKnown RBP6.37□□□□□ -1.39
RBM39-228ENST00000471635 MATN3O15232 486 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 NAT2P11245 290 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 ERCC5P28715 1186 aaPredicted RBP6.37□□□□□ -1.39
RBM39-228ENST00000471635 MAGEA10P43363 369 aaPredicted RBP6.37□□□□□ -1.39
RBM39-228ENST00000471635 FOXO4P98177 505 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 POMZP3Q6PJE2 187 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 CRACR2BQ8N4Y2 399 aaPredicted RBP6.37□□□□□ -1.39
RBM39-228ENST00000471635 TP53I13Q8NBR0 393 aaPredicted RBP6.37□□□□□ -1.39
RBM39-228ENST00000471635 CAPN10Q9HC96 672 aa6.37□□□□□ -1.39
RBM39-228ENST00000471635 FFAR3O14843 346 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
RBM39-228ENST00000471635 NPHS1O60500 1241 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
RBM39-228ENST00000471635 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
RBM39-228ENST00000471635 ASGR2P07307 311 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 NCAM1P13591 858 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 PLS3P13797 630 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 HMGA2P52926 109 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 NCAPHQ15003 741 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 MBLAC2Q68D91 279 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 RNF38Q9H0F5 515 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 NUDT5Q9UKK9 219 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 PMF1-BGLAPU3KQ54 211 aa6.36□□□□□ -1.39
RBM39-228ENST00000471635 FSHBP01225 129 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 FUCA1P04066 466 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 THBDP07204 575 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 PMLP29590 882 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 ZNF143P52747 638 aaPredicted RBP6.35□□□□□ -1.39
RBM39-228ENST00000471635 LARP1BQ659C4 914 aaKnown RBP6.35□□□□□ -1.39
RBM39-228ENST00000471635 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 C6orf15Q6UXA7 325 aaPredicted RBP6.35□□□□□ -1.39
RBM39-228ENST00000471635 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 TRIM59Q8IWR1 403 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 ADGRG2Q8IZP9 1017 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 FNIP1Q8TF40 1166 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 COPS5Q92905 334 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 TSPAN17Q96FV3 270 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 PEX11GQ96HA9 241 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 MENTQ9BUN1 341 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 BTG4Q9NY30 223 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 SIT1Q9Y3P8 196 aa6.35□□□□□ -1.39
RBM39-228ENST00000471635 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
RBM39-228ENST00000471635 B2RBV5 119 aa6.34□□□□□ -1.39
RBM39-228ENST00000471635 VWA3BQ502W6 1294 aa6.34□□□□□ -1.39
RBM39-228ENST00000471635 VPS37DQ86XT2 251 aa6.34□□□□□ -1.39
RBM39-228ENST00000471635 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.34□□□□□ -1.39
RBM39-228ENST00000471635 MARCH2Q9P0N8 246 aa6.34□□□□□ -1.39
RBM39-228ENST00000471635 NTRK1P04629 796 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 KCNC1P48547 511 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 ADAM17P78536 824 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 CAP1Q01518 475 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 INF2Q27J81 1249 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 BTN2A2Q8WVV5 523 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 MRGPRX3Q96LB0 322 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 MMP19Q99542 508 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
RBM39-228ENST00000471635 TBX1O43435 398 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 SLURP1P55000 103 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 HTRA3P83110 453 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 SLC9A5Q14940 896 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 SV2CQ496J9 727 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 TEX2Q8IWB9 1127 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 FAM178BQ8IXR5 827 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 PLEKHO2Q8TD55 490 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 ZNF526Q8TF50 670 aaPredicted RBP6.32□□□□□ -1.4
RBM39-228ENST00000471635 DPF3Q92784 378 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
RBM39-228ENST00000471635 C1QTNF3-AMACRE9PGA6 284 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 DDAH1O94760 285 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 ITGAVP06756 1048 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 TCF3P15923 654 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 ETFBP38117 255 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 LIPIQ6XZB0 460 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 SAPCD2Q86UD0 394 aa6.31□□□□□ -1.4
RBM39-228ENST00000471635 FRS2Q8WU20 508 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms