RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CGNQ9P2M7 1197 aaKnown RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 KRT79Q5XKE5 535 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 SLFN13Q68D06 897 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 CDK5RAP3Q96JB5 506 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 PNMA5Q96PV4 448 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 CCDC94Q9BW85 323 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 LRRC27Q9C0I9 530 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 BLOC1S4Q9NUP1 217 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 MAGEC2Q9UBF1 373 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 DDX25Q9UHL0 483 aaKnown RBP20.84■□□□□ 0.93
COL20A1-205ENST00000471582 HDAC9Q9UKV0 1011 aa20.84■□□□□ 0.93
COL20A1-205ENST00000471582 ICA1Q05084 483 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 QRICH1Q2TAL8 776 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 FER1L6Q2WGJ9 1857 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 TMEM119Q4V9L6 283 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 MCTP2Q6DN12 878 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 TMTC1Q8IUR5 882 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 FAM114A1Q8IWE2 563 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 CPLX3Q8WVH0 158 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 LARP4BQ92615 738 aaKnown RBP20.83■□□□□ 0.93
COL20A1-205ENST00000471582 SYNPO2Q9UMS6 1093 aa20.83■□□□□ 0.93
COL20A1-205ENST00000471582 SOWAHDA6NJG2 315 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 UBXN1Q04323 297 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 RAD9BQ6WBX8 426 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 GMCL1Q96IK5 515 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 DUSP9Q99956 384 aaKnown RBP20.82■□□□□ 0.92
COL20A1-205ENST00000471582 ABHD10Q9NUJ1 306 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 ADGRG1Q9Y653 693 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 MYH7BA7E2Y1 1941 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 FAM196BA6NMK8 535 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 SLC26A4O43511 780 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 SLURP2P0DP57 97 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 STK4Q13043 487 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 UNC13DQ70J99 1090 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 SIAH1Q8IUQ4 282 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 OGFOD1Q8N543 542 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 CSGALNACT2Q8N6G5 542 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 MB21D1Q8N884 522 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 RAD54LQ92698 747 aa20.82■□□□□ 0.92
COL20A1-205ENST00000471582 TDRD3Q9H7E2 651 aaKnown RBP20.82■□□□□ 0.92
COL20A1-205ENST00000471582 UTRNP46939 3433 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 VIL1P09327 827 aaKnown RBP20.81■□□□□ 0.92
COL20A1-205ENST00000471582 USP11P51784 963 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 AP3B2Q13367 1082 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 SEPT2Q15019 361 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 CDC37Q16543 378 aaPredicted RBP20.81■□□□□ 0.92
COL20A1-205ENST00000471582 ABCB5Q2M3G0 1257 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 NIM1KQ8IY84 436 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 ZNF507Q8TCN5 953 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 SNX29Q8TEQ0 813 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 TAOK3Q9H2K8 898 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 COL4A5P29400 1685 aa20.81■□□□□ 0.92
COL20A1-205ENST00000471582 POTEMA6NI47 508 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 FANCGO15287 622 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 DNM2P50570 870 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 NAA30Q147X3 362 aaPredicted RBP20.8■□□□□ 0.92
COL20A1-205ENST00000471582 MTF1Q14872 753 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 HAS1Q92839 578 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 NUP88Q99567 741 aaPredicted RBP20.8■□□□□ 0.92
COL20A1-205ENST00000471582 DESI2Q9BSY9 194 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 MYMKA6NI61 221 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 PSMD14O00487 310 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 RAD17O75943 681 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 GNG11P61952 73 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 HYIQ5T013 277 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 CYP26C1Q6V0L0 522 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 ZNRF3Q9ULT6 936 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
COL20A1-205ENST00000471582 CYP3A7-CYP3A51PA0A087WV96 503 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 F5H6K3 240 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 CYP3A7P24462 503 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 KLRC3Q07444 240 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 MCM6Q14566 821 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 ANKRD40Q6AI12 368 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 CENPPQ6IPU0 288 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 FOXR2Q6PJQ5 311 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 KIAA0895Q8NCT3 520 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 PRMT6Q96LA8 375 aaPredicted RBP20.79■□□□□ 0.92
COL20A1-205ENST00000471582 MBOAT7Q96N66 472 aa20.79■□□□□ 0.92
COL20A1-205ENST00000471582 FCER1AP12319 257 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 CASQ1P31415 396 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 PSMD2Q13200 908 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 SHROOM1Q2M3G4 852 aaPredicted RBP20.78■□□□□ 0.92
COL20A1-205ENST00000471582 CREBRFQ8IUR6 639 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 TUBGCP2Q9BSJ2 902 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 MRPL44Q9H9J2 332 aaKnown RBP20.78■□□□□ 0.92
COL20A1-205ENST00000471582 PCDHA12Q9UN75 941 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 SPDYE2BA6NHP3 402 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 SPDYE6P0CI01 402 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 KRT9P35527 623 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 DLGAP5Q15398 846 aa20.78■□□□□ 0.92
COL20A1-205ENST00000471582 GUF1Q8N442 669 aaKnown RBP20.78■□□□□ 0.92
COL20A1-205ENST00000471582 RETREG2Q8NC44 543 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms