RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 GPM6BQ13491 265 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 UBE3CQ15386 1083 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 LRRFIP1Q32MZ4 808 aaKnown RBP8.15□□□□□ -1.1
HDAC1-204ENST00000471488 GDF6Q6KF10 455 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-204ENST00000471488 SLC30A10Q6XR72 485 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
HDAC1-204ENST00000471488 C7orf31Q8N865 590 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 BANK1Q8NDB2 785 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 GMCL1P1Q8NEA9 526 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 AFAP1L1Q8TED9 768 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 YME1L1Q96TA2 773 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 PIEZO1Q92508 2521 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 WDFY4Q6ZS81 3184 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 FRMPD2Q68DX3 1309 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 ABHD14A-ACY1A0A1B0GW23 586 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 TSPY2A6NKD2 308 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 GSG1L2A8MUP6 293 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 NFIBO00712 420 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 ST18O60284 1047 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 KPNA6O60684 536 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 SLC3A2P08195 630 aaKnown RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 RLBP1P12271 317 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 IRS1P35568 1242 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 ZP2Q05996 745 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 TCTN1Q2MV58 587 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 TIGD5Q53EQ6 642 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 IER5LQ5T953 404 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 RNF207Q6ZRF8 634 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 SEPT14Q6ZU15 432 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 ADHFE1Q8IWW8 467 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 RPAP2Q8IXW5 612 aaPredicted RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 DHX37Q8IY37 1157 aaKnown RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 CAGE1Q8TC20 777 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 AFG1LQ8WV93 481 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 MRPL38Q96DV4 380 aaKnown RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 STRBPQ96SI9 672 aaKnown RBP8.14□□□□□ -1.11
HDAC1-204ENST00000471488 HAUS7Q99871 368 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 KCNH6Q9H252 994 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 TOMM22Q9NS69 142 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 INSL6Q9Y581 213 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 TANC1Q9C0D5 1861 aa8.14□□□□□ -1.11
HDAC1-204ENST00000471488 IGKV6D-41A0A0C4DH26 115 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 NMT2O60551 498 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 GFRA3O60609 400 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 NBNO60934 754 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 HMMRO75330 724 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 CKBP12277 381 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 ATP5JP18859 108 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 CTNNB1P35222 781 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 PTPN5P54829 565 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
HDAC1-204ENST00000471488 LY6KQ17RY6 165 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 USH1GQ495M9 461 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 EPC2Q52LR7 807 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 TTBK2Q6IQ55 1244 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 RCSD1Q6JBY9 416 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 RPAINQ86UA6 219 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 PRSS33Q8NF86 280 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 ATOH1Q92858 354 aaPredicted RBP8.13□□□□□ -1.11
HDAC1-204ENST00000471488 MKL1Q969V6 931 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 PTPRSQ13332 1948 aa8.13□□□□□ -1.11
HDAC1-204ENST00000471488 TET1Q8NFU7 2136 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 TRIP12Q14669 1992 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 B4DLN1 442 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 M0R2C6 588 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 STXBP3O00186 592 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 GPAA1O43292 621 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 RANBP6O60518 1105 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 EFCAB14O75071 495 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 ICAM1P05362 532 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 ZNF286BP0CG31 522 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 IBSPP21815 317 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 THPOP40225 353 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 MRPL12P52815 198 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 ZNF200P98182 395 aaPredicted RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 ZNF618Q5T7W0 954 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 TSHZ3Q63HK5 1081 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 NEDD1Q8NHV4 660 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 NEK9Q8TD19 979 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 OSBP2Q969R2 916 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 PABPC5Q96DU9 382 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
HDAC1-204ENST00000471488 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
HDAC1-204ENST00000471488 NACAP1Q9BZK3 213 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms