RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TMTC2Q8N394 836 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 TMEM199Q8N511 208 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 OR6J1Q8NGC5 347 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 IGDCC4Q8TDY8 1250 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 RMDN3Q96TC7 470 aa15.68■□□□□ 0.1
HMGN1-211ENST00000471260 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-211ENST00000471260 MYH6P13533 1939 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
HMGN1-211ENST00000471260 HSD17B4P51659 736 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 PURAQ00577 322 aaKnown RBP15.67■□□□□ 0.1
HMGN1-211ENST00000471260 PPIGQ13427 754 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGN1-211ENST00000471260 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 TMEM63BQ5T3F8 832 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 STOX1Q6ZVD7 989 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 MB21D2Q8IYB1 491 aaPredicted RBP15.67■□□□□ 0.1
HMGN1-211ENST00000471260 TBC1D5Q92609 795 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 TAAR1Q96RJ0 339 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 ESYT1Q9BSJ8 1104 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 LSG1Q9H089 658 aaKnown RBP15.67■□□□□ 0.1
HMGN1-211ENST00000471260 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 GRIN2DO15399 1336 aa15.67■□□□□ 0.1
HMGN1-211ENST00000471260 A6NJR5 290 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 CFBP00751 764 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 SUPT20HL2P0C7V6 817 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 SMARCA1P28370 1054 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 ARHGEF16Q5VV41 709 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 CASC1Q6TDU7 716 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
HMGN1-211ENST00000471260 MTG1Q9BT17 334 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-211ENST00000471260 PCDHA1Q9Y5I3 950 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 TAF6LQ9Y6J9 622 aa15.66■□□□□ 0.1
HMGN1-211ENST00000471260 PNMA6FA0A0J9YX94 578 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 EIF3JO75822 258 aaKnown RBP15.65■□□□□ 0.1
HMGN1-211ENST00000471260 DDAH1O94760 285 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 PTGS1P23219 599 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 MCM5P33992 734 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 ANTXR2P58335 489 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 CCDC62Q6P9F0 684 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 Q7L0L9 218 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 CHST3Q7LGC8 479 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 PXMP2Q9NR77 195 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 COL20A1Q9P218 1284 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 STXBP5LQ9Y2K9 1186 aa15.65■□□□□ 0.1
HMGN1-211ENST00000471260 OPLAHO14841 1288 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 CYTH3O43739 400 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 B4GALT4O60513 344 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 NR3C2P08235 984 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 KIF5BP33176 963 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 EPHB4P54760 987 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 PSMC6P62333 389 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 PTPN11Q06124 597 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-211ENST00000471260 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 ZNF697Q5TEC3 545 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 NFRKBQ6P4R8 1299 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 PSRC1Q6PGN9 363 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-211ENST00000471260 CTCFLQ8NI51 663 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-211ENST00000471260 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 ALDH8A1Q9H2A2 487 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-211ENST00000471260 HIPK3Q9H422 1215 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 LY9Q9HBG7 655 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 SENP2Q9HC62 589 aa15.64■□□□□ 0.09
HMGN1-211ENST00000471260 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-211ENST00000471260 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-211ENST00000471260 SLC27A2O14975 620 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 PRC1O43663 620 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 PPP1R11O60927 126 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-211ENST00000471260 ARIH2O95376 493 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 GH1P01241 217 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 MYL3P08590 195 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 CSF2RAP15509 400 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 LIFRP42702 1097 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 GNAQP50148 359 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 RNF20Q5VTR2 975 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 KCNV1Q6PIU1 500 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 SEPT14Q6ZU15 432 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 HOMER1Q86YM7 354 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 ZNF654Q8IZM8 581 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 EMID1Q96A84 441 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-211ENST00000471260 PIGSQ96S52 555 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 SPZ1Q9BXG8 430 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 PPP1R12CQ9BZL4 782 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 ANO2Q9NQ90 1003 aa15.63■□□□□ 0.09
HMGN1-211ENST00000471260 GCOM1H8Y6P7 765 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-211ENST00000471260 POLR2MP0CAP2 368 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 CALM1P0DP23 149 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 CALM2P0DP24 149 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 CALM3P0DP25 149 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 TGFB3P10600 412 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 EIF2AK2P19525 551 aaKnown RBP15.62■□□□□ 0.09
HMGN1-211ENST00000471260 SLC35G1Q2M3R5 365 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 TMEM240Q5SV17 173 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 COPS5Q92905 334 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.092e-9■■■□□ 16.5
HMGN1-211ENST00000471260 PDCD2LQ9BRP1 358 aa15.62■□□□□ 0.09
HMGN1-211ENST00000471260 IL23AQ9NPF7 189 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 388.5 ms