RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PTPAQ15257 358 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 DIS3LQ8TF46 1054 aaKnown RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 TRIB2Q92519 343 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 MRPS27Q92552 414 aaKnown RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 APBA2Q99767 749 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 JMJD4Q9H9V9 463 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 FEM1BQ9UK73 627 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 ZMYND8Q9ULU4 1186 aaPredicted RBP10.43□□□□□ -0.74
PTPRE-207ENST00000471218 KCNJ14Q9UNX9 436 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 PTPRFP10586 1907 aa10.43□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC194A0A1B0GVG4 234 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 SOX1O00570 391 aaPredicted RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 STRNO43815 780 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 ADCY7P51828 1080 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 ATP2B2Q01814 1243 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 AP3B2Q13367 1082 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 ZSCAN23Q3MJ62 389 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 SYDE2Q5VT97 1194 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 RBM43Q6ZSC3 357 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 GPR142Q7Z601 462 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 ADGRF4Q8IZF3 695 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 REXO1Q8N1G1 1221 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 ARRDC4Q8NCT1 418 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 CUL5Q93034 780 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC34Q96HJ3 373 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 C12orf42Q96LP6 360 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 TIGD1Q96MW7 591 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 RIC8AQ9NPQ8 531 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 MTMR10Q9NXD2 777 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
PTPRE-207ENST00000471218 RBPJLQ9UBG7 517 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 MYH15Q9Y2K3 1946 aa10.42□□□□□ -0.74
PTPRE-207ENST00000471218 FSD2A1L4K1 749 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 SLC15A5A6NIM6 579 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 GADD45BO75293 160 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 FOSP01100 380 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 GOLGA8HP0CJ92 632 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 COL6A1P12109 1028 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 GCFC2P16383 781 aaKnown RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PTPREP23469 700 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PRPHP41219 470 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 CACNB2Q08289 660 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 NR5A1Q13285 461 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 NONOQ15233 471 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 MORN1Q5T089 497 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 AXDND1Q5T1B0 1012 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 MOXD1Q6UVY6 613 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 LBX2Q6XYB7 198 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 USP6NLQ92738 828 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PIGSQ96S52 555 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 FEZ1Q99689 392 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 AMNQ9BXJ7 453 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 HOXC10Q9NYD6 342 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 USP25Q9UHP3 1055 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PCDHA7Q9UN72 937 aa10.41□□□□□ -0.74
PTPRE-207ENST00000471218 SRPRBQ9Y5M8 271 aaKnown RBP10.41□□□□□ -0.74
PTPRE-207ENST00000471218 PHIPQ8WWQ0 1821 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 SLC26A4O43511 780 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 KINO60870 393 aaKnown RBP10.4□□□□□ -0.74
PTPRE-207ENST00000471218 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 HOXC6P09630 235 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 SYN1P17600 705 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
PTPRE-207ENST00000471218 FOSBP53539 338 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 ATP2C1P98194 919 aaPredicted RBP10.4□□□□□ -0.74
PTPRE-207ENST00000471218 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 LHX8Q68G74 356 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 LRSAM1Q6UWE0 723 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 PAGR1Q9BTK6 254 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 NUP62CLQ9H1M0 184 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 RANBP17Q9H2T7 1088 aaKnown RBP10.4□□□□□ -0.74
PTPRE-207ENST00000471218 CLSTN2Q9H4D0 955 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 GPCPD1Q9NPB8 672 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 MAP3K20Q9NYL2 800 aaKnown RBP10.4□□□□□ -0.74
PTPRE-207ENST00000471218 TMEM63CQ9P1W3 806 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 CLIC4Q9Y696 253 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 MYH6P13533 1939 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
PTPRE-207ENST00000471218 LOC285556D6RIA3 1793 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 FRMPD2Q68DX3 1309 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms