RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 PIK3CDO00329 1044 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 CPLX1O14810 134 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
SCNM1-205ENST00000471039 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
SCNM1-205ENST00000471039 NAPAP54920 295 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 PDE4DQ08499 809 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 RABEP1Q15276 862 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 PKN1Q16512 942 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 ME3Q16798 604 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
SCNM1-205ENST00000471039 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 RMDN3Q96TC7 470 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
SCNM1-205ENST00000471039 VTA1Q9NP79 307 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 BARHL2Q9NY43 387 aa14.28□□□□□ -0.12
SCNM1-205ENST00000471039 STK36Q9NRP7 1315 aa14.27□□□□□ -0.12
SCNM1-205ENST00000471039 MEIS2O14770 477 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
SCNM1-205ENST00000471039 RGS19P49795 217 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 ST3GAL1Q11201 340 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 UBE2SQ16763 222 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 UBE2Q1Q7Z7E8 422 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 IL31RAQ8NI17 732 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 SMARCC2Q8TAQ2 1214 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 CUL5Q93034 780 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 PDCD2LQ9BRP1 358 aa14.27□□□□□ -0.13
SCNM1-205ENST00000471039 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 B4DLN1 442 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 CDKL5O76039 1030 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 RARBP10826 455 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 CAPN2P17655 700 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 ADCYAP1R1P41586 468 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 ADCY7P51828 1080 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 AKAP17AQ02040 695 aaKnown RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 PGM5Q15124 567 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 TAPT1Q6NXT6 567 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 DIS3LQ8TF46 1054 aaKnown RBP14.26□□□□□ -0.13
SCNM1-205ENST00000471039 IWS1Q96ST2 819 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 PSTPIP2Q9H939 334 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
SCNM1-205ENST00000471039 ESYT2A0FGR8 921 aa14.25□□□□□ -0.13
SCNM1-205ENST00000471039 CTDNEP1O95476 244 aa14.25□□□□□ -0.13
SCNM1-205ENST00000471039 SSRP1Q08945 709 aaKnown RBP14.25□□□□□ -0.13
SCNM1-205ENST00000471039 RIC8AQ9NPQ8 531 aa14.25□□□□□ -0.13
SCNM1-205ENST00000471039 XPNPEP3Q9NQH7 507 aa14.25□□□□□ -0.13
SCNM1-205ENST00000471039 PDGFCQ9NRA1 345 aa14.25□□□□□ -0.13
SCNM1-205ENST00000471039 RBM47A0AV96 593 aaKnown RBP14.24□□□□□ -0.13
SCNM1-205ENST00000471039 ADAMTS4O75173 837 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 DUSP11O75319 330 aaKnown RBP14.24□□□□□ -0.13
SCNM1-205ENST00000471039 DEXIO95424 95 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 NR3C2P08235 984 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 CLK2P49760 499 aaKnown RBP14.24□□□□□ -0.13
SCNM1-205ENST00000471039 STXBP2Q15833 593 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 TLK2Q86UE8 772 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 TEX2Q8IWB9 1127 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 CCDC148Q8NFR7 591 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 CCDC12Q8WUD4 166 aaPredicted RBP14.24□□□□□ -0.13
SCNM1-205ENST00000471039 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 VPS54Q9P1Q0 977 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
SCNM1-205ENST00000471039 LTBP2Q14767 1821 aa14.24□□□□□ -0.13
SCNM1-205ENST00000471039 WDR81Q562E7 1941 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 DNM1LO00429 736 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 ST18O60284 1047 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 DTNBO60941 627 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 PGK1P00558 417 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 SMPD1P17405 629 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 PTGS1P23219 599 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 CCND2P30279 289 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 TNFAIP2Q03169 654 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 LRRC41Q15345 812 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 GJC2Q5T442 439 aaPredicted RBP14.23□□□□□ -0.13
SCNM1-205ENST00000471039 NSUN7Q8NE18 718 aaKnown RBP14.23□□□□□ -0.13
SCNM1-205ENST00000471039 SCFD2Q8WU76 684 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 ZMYND12Q9H0C1 365 aa14.23□□□□□ -0.13
SCNM1-205ENST00000471039 UPF3AQ9H1J1 476 aaKnown RBP14.23□□□□□ -0.13
SCNM1-205ENST00000471039 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 MYADML2A6NDP7 307 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 KBTBD13C9JR72 458 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 ADAMTS3O15072 1205 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 ARIH2O95376 493 aa14.22□□□□□ -0.13
SCNM1-205ENST00000471039 CD2BP2O95400 341 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms