RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 TXNP10599 105 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 HSPD1P10809 573 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 PDE1AP54750 535 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 MFAP1P55081 439 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 PTPN11Q06124 597 aaPredicted RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 AAK1Q2M2I8 961 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 USH1GQ495M9 461 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 GPATCH4Q5T3I0 446 aaKnown RBP16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 SLC9A7Q96T83 725 aa16.27■□□□□ 0.2
SEMA3F-208ENST00000470737 NCOR1O75376 2440 aa16.27■□□□□ 0.19
SEMA3F-208ENST00000470737 CHD9Q3L8U1 2897 aa16.27■□□□□ 0.19
SEMA3F-208ENST00000470737 CCDC171Q6TFL3 1326 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 A6NJR5 290 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 EDNRBP24530 442 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 ESR2Q92731 530 aa16.26■□□□□ 0.19
SEMA3F-208ENST00000470737 MYH6P13533 1939 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 CA3P07451 260 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 COL9A1P20849 921 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 NMIQ13287 307 aaPredicted RBP16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 CCDC178Q5BJE1 867 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 RGS22Q8NE09 1264 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 COPS5Q92905 334 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 RILPL2Q969X0 211 aa16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 TRIP12Q14669 1992 aaPredicted RBP16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
SEMA3F-208ENST00000470737 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 KCNJ6P48051 423 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 AAMPQ13685 434 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 ZNF589Q86UQ0 364 aaPredicted RBP16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 IQCA1Q86XH1 822 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 VWCEQ96DN2 955 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 MAF1Q9H063 256 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 MUC3AQ02505 3323 aa16.24■□□□□ 0.19
SEMA3F-208ENST00000470737 ABCB11O95342 1321 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 ZNF213O14771 459 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 GH1P01241 217 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 NT5C2P49902 561 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 PTGISQ16647 500 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 MCF2L2Q86YR7 1114 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 TBC1D10CQ8IV04 446 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 CAGE1Q8TC20 777 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 CERS4Q9HA82 394 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 KIAA1217Q5T5P2 1943 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 CHD7Q9P2D1 2997 aa16.23■□□□□ 0.19
SEMA3F-208ENST00000470737 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 SEPT14Q6ZU15 432 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 DGKHQ86XP1 1220 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 HERC6Q8IVU3 1022 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 NSUN6Q8TEA1 469 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
SEMA3F-208ENST00000470737 NEDD4P46934 1319 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 RFXAPO00287 272 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 TLL1O43897 1013 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 ARIH2O95376 493 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 STXBP2Q15833 593 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 AFG1LQ8WV93 481 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 MTCH2Q9Y6C9 303 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 LAMA4Q16363 1823 aa16.21■□□□□ 0.19
SEMA3F-208ENST00000470737 PARNO95453 639 aaKnown RBP16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 MMP3P08254 477 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 POU3F3P20264 500 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 TFF2Q03403 129 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 TAP1Q03518 808 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 LY6KQ17RY6 165 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 TAAR1Q96RJ0 339 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 RMDN3Q96TC7 470 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 ZBED2Q9BTP6 218 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 LNPKQ9C0E8 428 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 CPVLQ9H3G5 476 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 COG5Q9UP83 839 aa16.2■□□□□ 0.18
SEMA3F-208ENST00000470737 KDM4AO75164 1064 aa16.19■□□□□ 0.18
SEMA3F-208ENST00000470737 SELPP16109 830 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms