RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
PTP4A1-202ENST00000470661 NGEFQ8N5V2 710 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 FAM13CQ8NE31 585 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 RTF1Q92541 710 aaKnown RBP8.8□□□□□ -1
PTP4A1-202ENST00000470661 SPON2Q9BUD6 331 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 LRRC3Q9BY71 257 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 PRDM5Q9NQX1 630 aaPredicted RBP8.8□□□□□ -1
PTP4A1-202ENST00000470661 CCDC39Q9UFE4 941 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 KLHL3Q9UH77 587 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 GTF2IRD1Q9UHL9 959 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 TPX2Q9ULW0 747 aaKnown RBP8.8□□□□□ -1
PTP4A1-202ENST00000470661 TJP1Q07157 1748 aa8.8□□□□□ -1
PTP4A1-202ENST00000470661 SOS1Q07889 1333 aaPredicted RBP8.8□□□□□ -1
PTP4A1-202ENST00000470661 DNAJA2O60884 412 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 CHRNA5P30532 468 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 APOBRQ0VD83 1088 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 RALBP1Q15311 655 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 SEZ6Q53EL9 994 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 NETO1Q8TDF5 533 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
PTP4A1-202ENST00000470661 PLAGL2Q9UPG8 496 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 PCDHB14Q9Y5E9 798 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 CD2APQ9Y5K6 639 aa8.79□□□□□ -1
PTP4A1-202ENST00000470661 CEMIPQ8WUJ3 1361 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 HEG1Q9ULI3 1381 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 WNT11O96014 354 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 PRNPP04156 253 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 CEACAM5P06731 702 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 TM4SF1P30408 202 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 RIPK4P57078 832 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 RACK1P63244 317 aaKnown RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 HDLBPQ00341 1268 aaKnown RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 NFIXQ14938 502 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 NFE2L2Q16236 605 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 TMEM201Q5SNT2 666 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 CDH24Q86UP0 819 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 METTL16Q86W50 562 aaKnown RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 NLGN1Q8N2Q7 840 aa8.78□□□□□ -1
PTP4A1-202ENST00000470661 EAF1Q96JC9 268 aaPredicted RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 PRKRIP1Q9H875 184 aaPredicted RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 USP42Q9H9J4 1324 aaKnown RBP8.78□□□□□ -1
PTP4A1-202ENST00000470661 MRC1P22897 1456 aa8.77□□□□□ -1
PTP4A1-202ENST00000470661 COL24A1Q17RW2 1714 aa8.77□□□□□ -1
PTP4A1-202ENST00000470661 PLEKHG2Q9H7P9 1386 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 CHURC1-FNTBB4DL54 471 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 STARD3NLO95772 234 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 KCNA3P22001 575 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 EIF5P55010 431 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 GP2P55259 537 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 TAF7Q15545 349 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 KRT24Q2M2I5 525 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 TBC1D9BQ66K14 1250 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 VSIG10LQ86VR7 867 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 ZNF526Q8TF50 670 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 DDX41Q9UJV9 622 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 LAS1LQ9Y4W2 734 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 MYBBP1AQ9BQG0 1328 aaKnown RBP8.77□□□□□ -1.01
PTP4A1-202ENST00000470661 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 ADAMTS7Q9UKP4 1686 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 POLRMTO00411 1230 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 IGF2BP3O00425 579 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 ANXA1P04083 346 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 MCM4P33991 863 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 TMPOP42166 694 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 YARSP54577 528 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 BNIP3Q12983 259 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 IFI16Q16666 785 aaKnown RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 ZNF574Q6ZN55 896 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 GK5Q6ZS86 529 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 FLCNQ8NFG4 579 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 BCL7CQ8WUZ0 217 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 MKNK2Q9HBH9 465 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 NARFQ9UHQ1 456 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 MAPK8IP1Q9UQF2 711 aa8.76□□□□□ -1.01
PTP4A1-202ENST00000470661 COL15A1P39059 1388 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 CBX7O95931 251 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 SERPINB2P05120 415 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 CD96P40200 585 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 CLCQ05315 142 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 SFRP5Q5T4F7 317 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 NT5DC4Q86YG4 428 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 SPACA3Q8IXA5 215 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 DNAJB8Q8NHS0 232 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 NKD1Q969G9 470 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 NT5C1AQ9BXI3 368 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 N4BP2Q86UW6 1770 aaPredicted RBP8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
PTP4A1-202ENST00000470661 C4AP0C0L4 1744 aa8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 DLG5Q8TDM6 1919 aa8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 SIPA1L3O60292 1781 aaPredicted RBP8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 CAMTA2O94983 1202 aa8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 MYL6BP14649 208 aa8.74□□□□□ -1.01
PTP4A1-202ENST00000470661 EIF2S2P20042 333 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms