RNA–Protein interactions for RNA: ENST00000470352.1

RPN2-208, Transcript of ribophorin II, human

TSL 2

Gene RPN2, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPN2-208	ENST00000470352	DDX49	Q9Y6V7	483 aa	Known RBP	13.97	□□□□□ -0.17
RPN2-208	ENST00000470352	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	hCG_1642624	A0A1W2PR95	340 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	ADCY6	O43306	1168 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	SEC24B	O95487	1268 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	PGK1	P00558	417 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	EIF2AK2	P19525	551 aa	Known RBP	13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	CST5	P28325	142 aa	Predicted RBP	13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	HOXA13	P31271	388 aa	Predicted RBP	13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	GJA9	P57773	515 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	STXBP2	Q15833	593 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	IQSEC1	Q6DN90	963 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	PPP1R18	Q6NYC8	613 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	HEATR3	Q7Z4Q2	680 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	DPF3	Q92784	378 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	CUL5	Q93034	780 aa		13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	UPF3A	Q9H1J1	476 aa	Known RBP	13.96	□□□□□ -0.17
RPN2-208	ENST00000470352	RBM47	A0AV96	593 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	MOXD2P	A6NHM9	499 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PIK3CD	O00329	1044 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	C6orf222	P0C671	652 aa	Predicted RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PDIA3	P30101	505 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	ADD1	P35611	737 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	ANKRD1	Q15327	319 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PRPF38B	Q5VTL8	546 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	NOL8	Q76FK4	1167 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	TLK2	Q86UE8	772 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	TEX2	Q8IWB9	1127 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	SMARCC2	Q8TAQ2	1214 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	SCFD2	Q8WU76	684 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	ZNF274	Q96GC6	653 aa	Predicted RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PDCD2L	Q9BRP1	358 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	TSEN34	Q9BSV6	310 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	WDR11	Q9BZH6	1224 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PDGFC	Q9NRA1	345 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	PHF24	Q9UPV7	400 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	GNE	Q9Y223	722 aa	Known RBP	13.95	□□□□□ -0.18
RPN2-208	ENST00000470352		Q9Y3F1	56 aa		13.95	□□□□□ -0.18
RPN2-208	ENST00000470352	FRMPD4	Q14CM0	1322 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	NKRF	O15226	690 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	EVI5	O60447	810 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	NR3C2	P08235	984 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	SMPD1	P17405	629 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	NAPA	P54920	295 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	NKX3-2	P78367	333 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	DUSP28	Q4G0W2	176 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	WWC2	Q6AWC2	1192 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	FCHSD1	Q86WN1	690 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	PCSK9	Q8NBP7	692 aa	Known RBP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	KLHDC9	Q8NEP7	349 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	AP5M1	Q9H0R1	490 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	PSTPIP2	Q9H939	334 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	NR2E3	Q9Y5X4	410 aa		13.94	□□□□□ -0.18
RPN2-208	ENST00000470352		V9GY48	417 aa	Predicted RBP	13.94	□□□□□ -0.18
RPN2-208	ENST00000470352	MEIS2	O14770	477 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	EIF3J	O75822	258 aa	Known RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	IFNAR1	P17181	557 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	CCND2	P30279	289 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	CCT2	P78371	535 aa	Known RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	AKAP17A	Q02040	695 aa	Known RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	TTLL4	Q14679	1199 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	PGM5	Q15124	567 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	PFKFB3	Q16875	520 aa	Predicted RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	RNF26	Q9BY78	433 aa	Predicted RBP	13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	BARHL2	Q9NY43	387 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352	ALPK3	Q96L96	1907 aa		13.93	□□□□□ -0.18
RPN2-208	ENST00000470352		A0A1W2PQ45	241 aa	Predicted RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352		A0A1W2PQY0	241 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	MYADML2	A6NDP7	307 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	STXBP3	O00186	592 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	CPLX1	O14810	134 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	STAM2	O75886	525 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	TXN	P10599	105 aa	Known RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	MYCL	P12524	364 aa	Predicted RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	SCG2	P13521	617 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	ACLY	P53396	1101 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	NTRK3	Q16288	839 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	KCNA10	Q16322	511 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	LRRC26	Q2I0M4	334 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	GNAS	Q5JWF2	1037 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	CPLX2	Q6PUV4	134 aa	Known RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	USP17L6P	Q6QN14	398 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	GLT8D2	Q9H1C3	349 aa		13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	NCOA5	Q9HCD5	579 aa	Known RBP	13.92	□□□□□ -0.18
RPN2-208	ENST00000470352	SPDYE3	A6NKU9	549 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	CTAGE5	O15320	804 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	DYNC1LI2	O43237	492 aa	Predicted RBP	13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	PRPF3	O43395	683 aa	Known RBP	13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	ZEB2	O60315	1214 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	ADCY7	P51828	1080 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	ATN1	P54259	1190 aa	Predicted RBP	13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	AK2	P54819	239 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	SNX17	Q15036	470 aa		13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	FSCN1	Q16658	493 aa	Known RBP	13.91	□□□□□ -0.18
RPN2-208	ENST00000470352	C1orf53	Q5VUE5	145 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms