RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
SREBF1-209ENST00000470247 LCTP09848 1927 aa12.85□□□□□ -0.35
SREBF1-209ENST00000470247 CYP3A7-CYP3A51PA0A087WV96 503 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 CYP3A7P24462 503 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 CIITAP33076 1130 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 TRAPPC10P48553 1259 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 USP11P51784 963 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 KCTD2Q14681 263 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 DNERQ8NFT8 737 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 USP28Q96RU2 1077 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 PCDHB6Q9Y5E3 794 aa12.84□□□□□ -0.35
SREBF1-209ENST00000470247 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
SREBF1-209ENST00000470247 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-209ENST00000470247 IGHA2P01877 340 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 NR3C2P08235 984 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 EDNRBP24530 442 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 PSMC4P43686 418 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 ALDH5A1P51649 535 aaPredicted RBP12.83□□□□□ -0.36
SREBF1-209ENST00000470247 UBXN2AP68543 259 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 PGM5Q15124 567 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 PTPAQ15257 358 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 RILPL1Q5EBL4 403 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 NEK8Q86SG6 692 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 VSIG10LQ86VR7 867 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
SREBF1-209ENST00000470247 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 JMYQ8N9B5 988 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 NPLOC4Q8TAT6 608 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 CYP2W1Q8TAV3 490 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 MORC4Q8TE76 937 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
SREBF1-209ENST00000470247 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
SREBF1-209ENST00000470247 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 IVNS1ABPQ9Y6Y0 642 aa12.83□□□□□ -0.36
SREBF1-209ENST00000470247 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 TDP2O95551 362 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 HOXC6P09630 235 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
SREBF1-209ENST00000470247 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 ZNF174Q15697 407 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 LETM2Q2VYF4 491 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 TTC38Q5R3I4 469 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 ARHGEF16Q5VV41 709 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 PCNX4Q63HM2 1172 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 PPP4R3AQ6IN85 833 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 LENG9Q96B70 501 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-209ENST00000470247 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
SREBF1-209ENST00000470247 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 MYH7BA7E2Y1 1941 aa12.82□□□□□ -0.36
SREBF1-209ENST00000470247 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 SLC37A4O43826 429 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 RGS20O76081 388 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 FCGRTP55899 365 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 SF3A1Q15459 793 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ANO1Q5XXA6 986 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ATL3Q6DD88 541 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 MOXD1Q6UVY6 613 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 IWS1Q96ST2 819 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 TMEM60Q9H2L4 133 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ADD3Q9UEY8 706 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 RCOR1Q9UKL0 485 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 GABRQQ9UN88 632 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
SREBF1-209ENST00000470247 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
SREBF1-209ENST00000470247 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MEIS1O00470 390 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms