RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 DLX3O60479 287 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 TSPAN15O95858 294 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 FUCA1P04066 466 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 PABPC1P11940 636 aaKnown RBP6.03□□□□□ -1.44
BRCA2-202ENST00000470094 MAPKAPK2P49137 400 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 GTF2A2P52657 109 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 CBX2Q14781 532 aaPredicted RBP6.03□□□□□ -1.44
BRCA2-202ENST00000470094 TESK1Q15569 626 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 PLEKHN1Q494U1 663 aaPredicted RBP6.03□□□□□ -1.44
BRCA2-202ENST00000470094 DENND5AQ6IQ26 1287 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 ZC3H14Q6PJT7 736 aaKnown RBP6.03□□□□□ -1.44
BRCA2-202ENST00000470094 TMC6Q7Z403 805 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 IPO9Q96P70 1041 aaKnown RBP6.03□□□□□ -1.44
BRCA2-202ENST00000470094 MTA3Q9BTC8 594 aa6.03□□□□□ -1.44
BRCA2-202ENST00000470094 KDM2BQ8NHM5 1336 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 F8W031 263 aaPredicted RBP6.02□□□□□ -1.45
BRCA2-202ENST00000470094 ETV2O00321 342 aaPredicted RBP6.02□□□□□ -1.45
BRCA2-202ENST00000470094 DIAPH1O60610 1272 aaKnown RBP6.02□□□□□ -1.45
BRCA2-202ENST00000470094 PPP1R11O60927 126 aaPredicted RBP6.02□□□□□ -1.45
BRCA2-202ENST00000470094 GLI4P10075 376 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 GLDCP23378 1020 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 RAP1GAPP47736 663 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 ZNF124Q15973 351 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 NFE2L2Q16236 605 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 WWC2Q6AWC2 1192 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 USP53Q70EK8 1073 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 TEX2Q8IWB9 1127 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 NETO2Q8NC67 525 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 DPF3Q92784 378 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 OSBP2Q969R2 916 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 CDC6Q99741 560 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 FBLN5Q9UBX5 448 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 NUDT5Q9UKK9 219 aa6.02□□□□□ -1.45
BRCA2-202ENST00000470094 ZC3H12DA2A288 527 aaKnown RBP6.01□□□□□ -1.45
BRCA2-202ENST00000470094 TCAF2A6NFQ2 919 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 ARNTLO00327 626 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 ADCY3O60266 1144 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 BCL6P41182 706 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 DLG4P78352 724 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 BMS1Q14692 1282 aaKnown RBP6.01□□□□□ -1.45
BRCA2-202ENST00000470094 YOD1Q5VVQ6 348 aaPredicted RBP6.01□□□□□ -1.45
BRCA2-202ENST00000470094 ATG14Q6ZNE5 492 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 ZBTB38Q8NAP3 1195 aaPredicted RBP6.01□□□□□ -1.45
BRCA2-202ENST00000470094 RCBTB1Q8NDN9 531 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 CHAMP1Q96JM3 812 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 DNAJC7Q99615 494 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 MBD1Q9UIS9 605 aaPredicted RBP6.01□□□□□ -1.45
BRCA2-202ENST00000470094 PCDHA2Q9Y5H9 948 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 NPFFR2Q9Y5X5 522 aa6.01□□□□□ -1.45
BRCA2-202ENST00000470094 C22orf46C9J442 243 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 NTRK1P04629 796 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 C1QTNF9P0C862 333 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 MED14OSP0DP75 135 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 LCP1P13796 627 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 FPR2P25090 351 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 PRR5P85299 388 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 ZNF200P98182 395 aaPredicted RBP6□□□□□ -1.45
BRCA2-202ENST00000470094 RSPO2Q6UXX9 243 aaPredicted RBP6□□□□□ -1.45
BRCA2-202ENST00000470094 CEP68Q76N32 757 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 DPH6Q7L8W6 267 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 DCP2Q8IU60 420 aaKnown RBP6□□□□□ -1.45
BRCA2-202ENST00000470094 PLEKHO2Q8TD55 490 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 DCAF4Q8WV16 495 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 TRMT2BQ96GJ1 504 aaKnown RBP6□□□□□ -1.45
BRCA2-202ENST00000470094 PEX11GQ96HA9 241 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 TMEM169Q96HH4 297 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 PHF20Q9BVI0 1012 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 SGPP1Q9BX95 441 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 ZSWIM4Q9H7M6 989 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 RXFP1Q9HBX9 757 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 GPR27Q9NS67 375 aa6□□□□□ -1.45
BRCA2-202ENST00000470094 COA3Q9Y2R0 106 aaPredicted RBP6□□□□□ -1.45
BRCA2-202ENST00000470094 TRBV23-1A0A0A0MS06 115 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 FAM153BP0C7A2 387 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 SUMO1P63165 101 aaKnown RBP5.99□□□□□ -1.45
BRCA2-202ENST00000470094 LSAMPQ13449 338 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 LONRF2Q1L5Z9 754 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 MROH9Q5TGP6 573 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 NLRP10Q86W26 655 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 MRFAP1L1Q96HT8 127 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 LNPKQ9C0E8 428 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 AP5M1Q9H0R1 490 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 CNTD2Q9H8S5 307 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 CDK11AQ9UQ88 783 aaPredicted RBP5.99□□□□□ -1.45
BRCA2-202ENST00000470094 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
BRCA2-202ENST00000470094 H7BY64 318 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 KRT1P04264 644 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 SLC9A5Q14940 896 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 ZC3H12BQ5HYM0 836 aaKnown RBP5.98□□□□□ -1.45
BRCA2-202ENST00000470094 FAM209AQ5JX71 171 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 LDHDQ86WU2 507 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 ANKLE2Q86XL3 938 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 RIOX2Q8IUF8 465 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 Q8N1Y9 231 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 MZB1Q8WU39 189 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 TSPAN17Q96FV3 270 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 GCM1Q9NP62 436 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 CD320Q9NPF0 282 aa5.98□□□□□ -1.45
BRCA2-202ENST00000470094 CLDND1Q9NY35 253 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms